Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CCDC89Q8N998 AC138907.5-202ENST00000569484 235 ntBASIC21.19■□□□□ 0.98
CCDC89Q8N998 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC89Q8N998 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC89Q8N998 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC89Q8N998 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 AC027612.3-201ENST00000413684 1047 ntBASIC21.18■□□□□ 0.98
CCDC89Q8N998 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 AC245052.3-201ENST00000450182 901 ntBASIC21.18■□□□□ 0.98
CCDC89Q8N998 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 KRT16P2-201ENST00000414673 1423 ntBASIC21.18■□□□□ 0.98
CCDC89Q8N998 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC89Q8N998 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC89Q8N998 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC89Q8N998 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC89Q8N998 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC89Q8N998 AFG3L1P-217ENST00000557444 2447 ntBASIC21.17■□□□□ 0.98
CCDC89Q8N998 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC89Q8N998 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 LINC02228-203ENST00000641970 1355 ntBASIC21.16■□□□□ 0.98
CCDC89Q8N998 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC89Q8N998 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC89Q8N998 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 AC099778.1-201ENST00000568593 1911 ntBASIC21.15■□□□□ 0.98
CCDC89Q8N998 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
CCDC89Q8N998 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC89Q8N998 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC89Q8N998 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC89Q8N998 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC89Q8N998 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC89Q8N998 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC89Q8N998 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC89Q8N998 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC89Q8N998 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC89Q8N998 AC010141.2-201ENST00000452426 721 ntBASIC21.14■□□□□ 0.97
CCDC89Q8N998 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC89Q8N998 RARRES2P11-201ENST00000635158 484 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms