Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL390719.1-204ENST00000412397 1219 ntBASIC21.08■□□□□ 0.97
SLC44A3Q8N4M1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC44A3Q8N4M1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A3Q8N4M1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
SLC44A3Q8N4M1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A3Q8N4M1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC44A3Q8N4M1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SLC44A3Q8N4M1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 AL445228.2-201ENST00000605589 952 ntBASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 AL353708.3-201ENST00000610272 989 ntBASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC44A3Q8N4M1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 PGM5P4-201ENST00000421970 445 ntBASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC44A3Q8N4M1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 CD177P1-201ENST00000606252 935 ntBASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 AC026471.5-201ENST00000615068 467 ntBASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 AC127496.7-201ENST00000625110 1798 ntBASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SLC44A3Q8N4M1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 TMPOP1-202ENST00000424642 1267 ntBASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC44A3Q8N4M1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms