Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 MTDHP1-201ENST00000605323 784 ntBASIC25.47■■□□□ 1.67
DDX60Q8IY21 AC124016.1-201ENST00000609552 612 ntBASIC25.47■■□□□ 1.67
DDX60Q8IY21 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
DDX60Q8IY21 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
DDX60Q8IY21 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX60Q8IY21 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX60Q8IY21 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.46■■□□□ 1.67
DDX60Q8IY21 AC005829.2-201ENST00000571422 1056 ntBASIC25.46■■□□□ 1.67
DDX60Q8IY21 MIR2861-201ENST00000636310 90 ntBASIC25.46■■□□□ 1.67
DDX60Q8IY21 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.45■■□□□ 1.67
DDX60Q8IY21 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
DDX60Q8IY21 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
DDX60Q8IY21 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
DDX60Q8IY21 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX60Q8IY21 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX60Q8IY21 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 MIR4497-201ENST00000583208 89 ntBASIC25.45■■□□□ 1.66
DDX60Q8IY21 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.45■■□□□ 1.66
DDX60Q8IY21 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.44■■□□□ 1.66
DDX60Q8IY21 RN7SL471P-201ENST00000580476 299 ntBASIC25.44■■□□□ 1.66
DDX60Q8IY21 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.44■■□□□ 1.66
DDX60Q8IY21 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.44■■□□□ 1.66
DDX60Q8IY21 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.44■■□□□ 1.66
DDX60Q8IY21 AC244015.2-201ENST00000616358 1861 ntBASIC25.44■■□□□ 1.66
DDX60Q8IY21 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.44■■□□□ 1.66
DDX60Q8IY21 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX60Q8IY21 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.43■■□□□ 1.66
DDX60Q8IY21 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX60Q8IY21 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
DDX60Q8IY21 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
DDX60Q8IY21 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX60Q8IY21 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX60Q8IY21 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.42■■□□□ 1.66
DDX60Q8IY21 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
DDX60Q8IY21 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
DDX60Q8IY21 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.42■■□□□ 1.66
DDX60Q8IY21 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.42■■□□□ 1.66
DDX60Q8IY21 AC133681.1-201ENST00000465482 601 ntBASIC25.42■■□□□ 1.66
DDX60Q8IY21 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX60Q8IY21 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX60Q8IY21 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX60Q8IY21 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms