Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 AC080038.3-201ENST00000623346 1952 ntBASIC19.48■□□□□ 0.71
RAB43Q86YS6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 DUSP5P2-201ENST00000426873 1033 ntBASIC19.48■□□□□ 0.71
RAB43Q86YS6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 AC091874.3-201ENST00000512672 1195 ntBASIC19.48■□□□□ 0.71
RAB43Q86YS6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 MYC-209ENST00000641252 345 ntBASIC19.48■□□□□ 0.71
RAB43Q86YS6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB43Q86YS6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB43Q86YS6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 KRT18P29-201ENST00000397031 1267 ntBASIC19.47■□□□□ 0.71
RAB43Q86YS6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 AC083880.1-201ENST00000608266 535 ntBASIC19.47■□□□□ 0.71
RAB43Q86YS6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB43Q86YS6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB43Q86YS6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 AC091799.1-201ENST00000422823 811 ntBASIC19.46■□□□□ 0.71
RAB43Q86YS6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.46■□□□□ 0.71
RAB43Q86YS6 ITM2C-210ENST00000620962 501 ntBASIC19.46■□□□□ 0.71
RAB43Q86YS6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB43Q86YS6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB43Q86YS6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RAB43Q86YS6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 AC100791.3-201ENST00000617619 330 ntBASIC19.44■□□□□ 0.7
RAB43Q86YS6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB43Q86YS6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB43Q86YS6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms