Protein–RNA interactions for Protein: Q7RTT5

SSX7, Protein SSX7, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX7Q7RTT5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX7Q7RTT5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSX7Q7RTT5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 AC239859.2-201ENST00000444165 318 ntBASIC16.27■□□□□ 0.2
SSX7Q7RTT5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSX7Q7RTT5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSX7Q7RTT5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 AC006455.2-201ENST00000429931 906 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 BX664725.1-201ENST00000438252 379 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KRT125P-201ENST00000546827 989 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 AC068587.7-201ENST00000641602 218 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 AC004408.2-201ENST00000623613 2777 ntBASIC16.26■□□□□ 0.19
SSX7Q7RTT5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SSX7Q7RTT5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 TNXA-203ENST00000507684 2038 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 AC010141.3-201ENST00000456659 717 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 pRNA.6-201ENST00000610482 90 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 pRNA.5-201ENST00000612139 90 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 pRNA.11-201ENST00000618423 90 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 pRNA.13-201ENST00000619112 90 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 AC026471.1-201ENST00000564629 3026 ntBASIC16.25■□□□□ 0.19
SSX7Q7RTT5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSX7Q7RTT5 AP006587.3-201ENST00000525742 1516 ntBASIC16.24■□□□□ 0.19
SSX7Q7RTT5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSX7Q7RTT5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms