Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC091305.1-201ENST00000479476 895 ntBASIC18.46■□□□□ 0.55
SHFQ7M4L6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SHFQ7M4L6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SHFQ7M4L6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHFQ7M4L6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHFQ7M4L6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.46■□□□□ 0.54
SHFQ7M4L6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SHFQ7M4L6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.45■□□□□ 0.54
SHFQ7M4L6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SHFQ7M4L6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SHFQ7M4L6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 MIR939-201ENST00000401314 82 ntBASIC18.44■□□□□ 0.54
SHFQ7M4L6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHFQ7M4L6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
SHFQ7M4L6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 AF213884.3-201ENST00000563833 479 ntBASIC18.43■□□□□ 0.54
SHFQ7M4L6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.43■□□□□ 0.54
SHFQ7M4L6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHFQ7M4L6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SHFQ7M4L6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 AC053503.5-201ENST00000601508 636 ntBASIC18.42■□□□□ 0.54
SHFQ7M4L6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 AC011484.1-201ENST00000377652 1995 ntBASIC18.42■□□□□ 0.54
SHFQ7M4L6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHFQ7M4L6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
SHFQ7M4L6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms