Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.09■□□□□ 0.17
LCNL1Q6ZST4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 AC116050.2-201ENST00000612102 1779 ntBASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 AL137060.1-201ENST00000618151 2648 ntBASIC16.08■□□□□ 0.17
LCNL1Q6ZST4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 AL162412.1-201ENST00000567129 965 ntBASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 AC142086.2-201ENST00000569753 217 ntBASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCNL1Q6ZST4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCNL1Q6ZST4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 KRT17P1-201ENST00000399211 1546 ntBASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 AL512625.2-201ENST00000417533 625 ntBASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 FAM21FP-204ENST00000608637 956 ntBASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LCNL1Q6ZST4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 AL049796.1-201ENST00000565336 1766 ntBASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 AC069152.1-201ENST00000438030 544 ntBASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.05■□□□□ 0.16
LCNL1Q6ZST4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms