Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 IKBKGP1-201ENST00000612193 1073 ntBASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COLCA1Q6ZS62 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
COLCA1Q6ZS62 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COLCA1Q6ZS62 CYP21A1P-202ENST00000354927 1481 ntBASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 AC087633.2-202ENST00000565166 1439 ntBASIC17.64■□□□□ 0.41
COLCA1Q6ZS62 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 PGM5P4-201ENST00000421970 445 ntBASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 AC092720.2-201ENST00000602388 1665 ntBASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 AC092667.1-201ENST00000434301 2586 ntBASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
COLCA1Q6ZS62 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AL162377.1-201ENST00000618844 1793 ntBASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AC004911.1-201ENST00000416316 871 ntBASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AL137784.2-201ENST00000607332 1000 ntBASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 AC080038.1-201ENST00000611274 1154 ntBASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COLCA1Q6ZS62 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 CYP2T1P-201ENST00000432607 1285 ntBASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COLCA1Q6ZS62 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms