Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 AC087633.2-202ENST00000565166 1439 ntBASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 PGM5P4-201ENST00000421970 445 ntBASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 AC087623.3-201ENST00000607047 1098 ntBASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 AC013268.1-206ENST00000638368 961 ntBASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 AC112229.1-201ENST00000639295 961 ntBASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FOXR2Q6PJQ5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FOXR2Q6PJQ5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.33■■□□□ 1.16
FOXR2Q6PJQ5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FOXR2Q6PJQ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 AC100791.3-201ENST00000617619 330 ntBASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FOXR2Q6PJQ5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FOXR2Q6PJQ5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 AC026271.2-201ENST00000428091 497 ntBASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 KRT18P5-201ENST00000436075 1291 ntBASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 TCF3P1-201ENST00000423021 1937 ntBASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
FOXR2Q6PJQ5 CYP21A1P-202ENST00000354927 1481 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms