Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPP4R3AQ6IN85 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 GPX1P1-201ENST00000388829 606 ntBASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 MCRIP2P1-201ENST00000394346 511 ntBASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPP4R3AQ6IN85 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 GUSBP6-202ENST00000438529 1198 ntBASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 MIR2861-201ENST00000636310 90 ntBASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PPP4R3AQ6IN85 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 TSPY6P-201ENST00000448518 926 ntBASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 AC087633.2-202ENST00000565166 1439 ntBASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPP4R3AQ6IN85 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 CYP2T3P-201ENST00000601990 817 ntBASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPP4R3AQ6IN85 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 MKRN4P-201ENST00000444706 1521 ntBASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPP4R3AQ6IN85 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 AC007225.1-201ENST00000566331 1836 ntBASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PPP4R3AQ6IN85 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms