Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC105036.2-201ENST00000569468 176 ntBASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC133552.2-202ENST00000575694 574 ntBASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 AL121832.2-201ENST00000610979 668 ntBASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DQA1Q5Y7H0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA1Q5Y7H0 AL137060.1-201ENST00000618151 2648 ntBASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 GPX1P1-201ENST00000388829 606 ntBASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC083906.2-201ENST00000511578 360 ntBASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 AL050303.2-201ENST00000619798 666 ntBASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA1Q5Y7H0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC29A4P1-201ENST00000398760 971 ntBASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 AL512625.2-201ENST00000417533 625 ntBASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 PGM5P4-201ENST00000421970 445 ntBASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DQA1Q5Y7H0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms