Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC30Q5VVM6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CCDC30Q5VVM6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 AC005229.4-201ENST00000610085 2198 ntBASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 RNA5SP413-201ENST00000516373 109 ntBASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC30Q5VVM6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.15■■□□□ 1.78
CCDC30Q5VVM6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 C2orf69P4-201ENST00000565394 541 ntBASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC30Q5VVM6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC30Q5VVM6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.14■■□□□ 1.77
CCDC30Q5VVM6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC30Q5VVM6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC30Q5VVM6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC30Q5VVM6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 AC007375.3-201ENST00000600936 2314 ntBASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC30Q5VVM6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 KRT8P36-201ENST00000489121 1440 ntBASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CCDC30Q5VVM6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 MIR4651-201ENST00000582622 73 ntBASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC30Q5VVM6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 HLA-B-256ENST00000639848 1089 ntBASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC30Q5VVM6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC30Q5VVM6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms