Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ARL4AP4-201ENST00000434170 518 ntBASIC15.22■□□□□ 0.03
LINC01559Q495D7 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 AC005224.4-201ENST00000583262 1652 ntBASIC15.22■□□□□ 0.03
LINC01559Q495D7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC01559Q495D7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01559Q495D7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 MIR4466-201ENST00000606121 54 ntBASIC15.21■□□□□ 0.03
LINC01559Q495D7 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC01559Q495D7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC01559Q495D7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
LINC01559Q495D7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
LINC01559Q495D7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC01559Q495D7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 AC092720.2-201ENST00000602388 1665 ntBASIC15.2■□□□□ 0.02
LINC01559Q495D7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 RN7SL121P-201ENST00000584223 273 ntBASIC15.2■□□□□ 0.02
LINC01559Q495D7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01559Q495D7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01559Q495D7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 IGHV3-19-201ENST00000521488 291 ntBASIC15.19■□□□□ 0.02
LINC01559Q495D7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 AP004607.4-201ENST00000530158 1459 ntBASIC15.19■□□□□ 0.02
LINC01559Q495D7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01559Q495D7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC01559Q495D7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC01559Q495D7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01559Q495D7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms