Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC092053.2-201ENST00000640557 1818 ntBASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC012306.2-201ENST00000609350 630 ntBASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 AC097493.4-201ENST00000641197 219 ntBASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTC1Q2NKJ3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 AL049637.2-201ENST00000641778 930 ntBASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTC1Q2NKJ3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 AC245052.3-201ENST00000450182 901 ntBASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTC1Q2NKJ3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.89■■□□□ 1.1
CTC1Q2NKJ3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CTC1Q2NKJ3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CTC1Q2NKJ3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CTC1Q2NKJ3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTC1Q2NKJ3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 RCN1P1-201ENST00000400413 996 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC087499.1-201ENST00000418141 1075 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC133681.1-201ENST00000465482 601 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 MTDHP1-201ENST00000605323 784 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC133561.5-201ENST00000635547 218 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 AC003102.1-202ENST00000563394 1796 ntBASIC21.89■■□□□ 1.09
CTC1Q2NKJ3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms