Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
EFNB3Q15768 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.48■□□□□ 0.39
EFNB3Q15768 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNB3Q15768 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNB3Q15768 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
EFNB3Q15768 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNB3Q15768 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.48■□□□□ 0.39
EFNB3Q15768 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNB3Q15768 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
EFNB3Q15768 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.47■□□□□ 0.39
EFNB3Q15768 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNB3Q15768 UNC93B5-201ENST00000530315 699 ntBASIC17.47■□□□□ 0.39
EFNB3Q15768 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
EFNB3Q15768 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EFNB3Q15768 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNB3Q15768 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 ITM2C-210ENST00000620962 501 ntBASIC17.47■□□□□ 0.39
EFNB3Q15768 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EFNB3Q15768 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
EFNB3Q15768 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNB3Q15768 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.47■□□□□ 0.39
EFNB3Q15768 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.46■□□□□ 0.39
EFNB3Q15768 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
EFNB3Q15768 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.46■□□□□ 0.39
EFNB3Q15768 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
EFNB3Q15768 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNB3Q15768 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
EFNB3Q15768 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNB3Q15768 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.46■□□□□ 0.39
EFNB3Q15768 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNB3Q15768 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFNB3Q15768 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
EFNB3Q15768 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNB3Q15768 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.46■□□□□ 0.38
EFNB3Q15768 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 ESRRAP1-201ENST00000400596 1257 ntBASIC17.45■□□□□ 0.38
EFNB3Q15768 AL356652.1-201ENST00000615962 565 ntBASIC17.45■□□□□ 0.38
EFNB3Q15768 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.45■□□□□ 0.38
EFNB3Q15768 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
EFNB3Q15768 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.45■□□□□ 0.38
EFNB3Q15768 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
EFNB3Q15768 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
EFNB3Q15768 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EFNB3Q15768 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
EFNB3Q15768 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
EFNB3Q15768 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.44■□□□□ 0.38
EFNB3Q15768 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.44■□□□□ 0.38
EFNB3Q15768 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.44■□□□□ 0.38
EFNB3Q15768 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 C2orf69P4-201ENST00000565394 541 ntBASIC17.44■□□□□ 0.38
EFNB3Q15768 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
EFNB3Q15768 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.44■□□□□ 0.38
EFNB3Q15768 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
EFNB3Q15768 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNB3Q15768 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB3Q15768 KRT18P29-201ENST00000397031 1267 ntBASIC17.43■□□□□ 0.38
EFNB3Q15768 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.43■□□□□ 0.38
EFNB3Q15768 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNB3Q15768 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 AC026366.1-201ENST00000488803 879 ntBASIC17.43■□□□□ 0.38
EFNB3Q15768 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.43■□□□□ 0.38
EFNB3Q15768 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms