Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.3■□□□□ 0.84
SF3A2Q15428 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.3■□□□□ 0.84
SF3A2Q15428 AC120498.8-201ENST00000614275 531 ntBASIC20.3■□□□□ 0.84
SF3A2Q15428 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SF3A2Q15428 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.3■□□□□ 0.84
SF3A2Q15428 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SF3A2Q15428 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
SF3A2Q15428 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
SF3A2Q15428 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SF3A2Q15428 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SF3A2Q15428 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SF3A2Q15428 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
SF3A2Q15428 AC139530.1-201ENST00000575312 1977 ntBASIC20.3■□□□□ 0.84
SF3A2Q15428 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SF3A2Q15428 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.29■□□□□ 0.84
SF3A2Q15428 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.29■□□□□ 0.84
SF3A2Q15428 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.29■□□□□ 0.84
SF3A2Q15428 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SF3A2Q15428 AC087742.1-201ENST00000575880 1738 ntBASIC20.29■□□□□ 0.84
SF3A2Q15428 C11orf96-202ENST00000528572 1834 ntBASIC20.29■□□□□ 0.84
SF3A2Q15428 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SF3A2Q15428 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.29■□□□□ 0.84
SF3A2Q15428 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SF3A2Q15428 EP400NL-214ENST00000641289 2402 ntBASIC20.28■□□□□ 0.84
SF3A2Q15428 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SF3A2Q15428 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 RARRES2P10-201ENST00000564312 460 ntBASIC20.28■□□□□ 0.84
SF3A2Q15428 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SF3A2Q15428 AC006557.6-201ENST00000623071 864 ntBASIC20.28■□□□□ 0.84
SF3A2Q15428 AC233723.2-201ENST00000623798 2106 ntBASIC20.28■□□□□ 0.84
SF3A2Q15428 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.28■□□□□ 0.84
SF3A2Q15428 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.27■□□□□ 0.84
SF3A2Q15428 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
SF3A2Q15428 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SF3A2Q15428 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.27■□□□□ 0.84
SF3A2Q15428 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 AL590326.2-201ENST00000625139 305 ntBASIC20.27■□□□□ 0.84
SF3A2Q15428 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.27■□□□□ 0.84
SF3A2Q15428 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SF3A2Q15428 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SF3A2Q15428 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
SF3A2Q15428 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.27■□□□□ 0.83
SF3A2Q15428 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SF3A2Q15428 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.27■□□□□ 0.83
SF3A2Q15428 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SF3A2Q15428 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SF3A2Q15428 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SF3A2Q15428 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.26■□□□□ 0.83
SF3A2Q15428 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SF3A2Q15428 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.26■□□□□ 0.83
SF3A2Q15428 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 AC026471.5-201ENST00000615068 467 ntBASIC20.26■□□□□ 0.83
SF3A2Q15428 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.26■□□□□ 0.83
SF3A2Q15428 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SF3A2Q15428 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms