Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 ARR2YPR200C 393 nt2.14□□□□□ -2.07
DDC1Q08949 BRE1YDL074C 2103 nt2.14□□□□□ -2.07
DDC1Q08949 YDR537CYDR537C 606 nt2.13□□□□□ -2.07
DDC1Q08949 UTP30YKR060W 825 nt2.13□□□□□ -2.07
DDC1Q08949 YNR021WYNR021W 1215 nt2.13□□□□□ -2.07
DDC1Q08949 YOL150CYOL150C 312 nt2.13□□□□□ -2.07
DDC1Q08949 YBR071WYBR071W 636 nt2.13□□□□□ -2.07
DDC1Q08949 AFR1YDR085C 1863 nt2.13□□□□□ -2.07
DDC1Q08949 GYP5YPL249C 2685 nt2.12□□□□□ -2.07
DDC1Q08949 RGL1YPL066W 1440 nt2.12□□□□□ -2.07
DDC1Q08949 LRP1YHR081W 555 nt2.12□□□□□ -2.07
DDC1Q08949 ATG11YPR049C 3537 nt2.12□□□□□ -2.07
DDC1Q08949 PSK2YOL045W 3306 nt2.11□□□□□ -2.07
DDC1Q08949 snR84snR84 550 nt2.11□□□□□ -2.07
DDC1Q08949 IRC2YDR112W 309 nt2.11□□□□□ -2.07
DDC1Q08949 VPS74YDR372C 1038 nt2.11□□□□□ -2.07
DDC1Q08949 RPL27BYDR471W 411 nt2.11□□□□□ -2.07
DDC1Q08949 GIC1YHR061C 945 nt2.11□□□□□ -2.07
DDC1Q08949 IST3YIR005W 447 nt2.11□□□□□ -2.07
DDC1Q08949 APQ13YJL075C 417 nt2.11□□□□□ -2.07
DDC1Q08949 TAP42YMR028W 1101 nt2.11□□□□□ -2.07
DDC1Q08949 UBX4YMR067C 1251 nt2.11□□□□□ -2.07
DDC1Q08949 YMR144WYMR144W 1029 nt2.11□□□□□ -2.07
DDC1Q08949 INP51YIL002C 2841 nt2.1□□□□□ -2.07
DDC1Q08949 YNL018CYNL018C 1839 nt2.1□□□□□ -2.07
DDC1Q08949 PRS3YHL011C 963 nt2.1□□□□□ -2.07
DDC1Q08949 YIL029CYIL029C 429 nt2.1□□□□□ -2.07
DDC1Q08949 BET4YJL031C 984 nt2.1□□□□□ -2.07
DDC1Q08949 YJR141WYJR141W 1044 nt2.1□□□□□ -2.07
DDC1Q08949 YLR202CYLR202C 327 nt2.1□□□□□ -2.07
DDC1Q08949 YMR304C-AYMR304C-A 351 nt2.1□□□□□ -2.07
DDC1Q08949 YNL179CYNL179C 438 nt2.1□□□□□ -2.07
DDC1Q08949 RIO2YNL207W 1278 nt2.1□□□□□ -2.07
DDC1Q08949 OST2YOR103C 393 nt2.1□□□□□ -2.07
DDC1Q08949 STH1YIL126W 4080 nt2.1□□□□□ -2.07
DDC1Q08949 HOS4YIL112W 3252 nt2.1□□□□□ -2.07
DDC1Q08949 BAS1YKR099W 2436 nt2.1□□□□□ -2.07
DDC1Q08949 IRC8YJL051W 2469 nt2.09□□□□□ -2.07
DDC1Q08949 UFD4YKL010C 4452 nt2.09□□□□□ -2.07
DDC1Q08949 PRE4YFR050C 801 nt2.09□□□□□ -2.07
DDC1Q08949 YGL042CYGL042C 306 nt2.09□□□□□ -2.07
DDC1Q08949 DGR1YNL130C-A 147 nt2.09□□□□□ -2.07
DDC1Q08949 YPL068CYPL068C 882 nt2.09□□□□□ -2.07
DDC1Q08949 NSL1YPL233W 651 nt2.09□□□□□ -2.07
DDC1Q08949 YCR108CYCR108C 192 nt2.08□□□□□ -2.08
DDC1Q08949 RRF1YHR038W 693 nt2.08□□□□□ -2.08
DDC1Q08949 YIR020CYIR020C 303 nt2.08□□□□□ -2.08
DDC1Q08949 ILM1YJR118C 612 nt2.08□□□□□ -2.08
DDC1Q08949 TRM7YBR061C 933 nt2.08□□□□□ -2.08
DDC1Q08949 YPR145C-AYPR145C-A 237 nt2.08□□□□□ -2.08
DDC1Q08949 PSO2YMR137C 1986 nt2.08□□□□□ -2.08
DDC1Q08949 MCD1YDL003W 1701 nt2.08□□□□□ -2.08
DDC1Q08949 RRI2YOL117W 1938 nt2.07□□□□□ -2.08
DDC1Q08949 PRP6YBR055C 2700 nt2.07□□□□□ -2.08
DDC1Q08949 COS111YBR203W 2775 nt2.07□□□□□ -2.08
DDC1Q08949 SIR4YDR227W 4077 nt2.07□□□□□ -2.08
DDC1Q08949 AHC2YCR082W 387 nt2.07□□□□□ -2.08
DDC1Q08949 YDL009CYDL009C 324 nt2.07□□□□□ -2.08
DDC1Q08949 YER119C-AYER119C-A 372 nt2.07□□□□□ -2.08
DDC1Q08949 PRM8YGL053W 714 nt2.07□□□□□ -2.08
DDC1Q08949 VPS20YMR077C 666 nt2.07□□□□□ -2.08
DDC1Q08949 YPL034WYPL034W 498 nt2.07□□□□□ -2.08
DDC1Q08949 YBR197CYBR197C 654 nt2.07□□□□□ -2.08
DDC1Q08949 YNL034WYNL034W 1839 nt2.07□□□□□ -2.08
DDC1Q08949 KAP123YER110C 3342 nt2.07□□□□□ -2.08
DDC1Q08949 YPR089WYPR089W 2667 nt2.06□□□□□ -2.08
DDC1Q08949 YMR013C-AYMR013C-A 150 nt2.06□□□□□ -2.08
DDC1Q08949 HHT2YNL031C 411 nt2.06□□□□□ -2.08
DDC1Q08949 SWM2YNR004W 441 nt2.06□□□□□ -2.08
DDC1Q08949 YPR096CYPR096C 303 nt2.06□□□□□ -2.08
DDC1Q08949 YOR343W-AYOR343W-A 1317 nt2.06□□□□□ -2.08
DDC1Q08949 MGM1YOR211C 2646 nt2.05□□□□□ -2.08
DDC1Q08949 TOR2YKL203C 7425 nt2.05□□□□□ -2.08
DDC1Q08949 CBF2YGR140W 2871 nt2.05□□□□□ -2.08
DDC1Q08949 INO80YGL150C 4470 nt2.05□□□□□ -2.08
DDC1Q08949 CHZ1YER030W 462 nt2.05□□□□□ -2.08
DDC1Q08949 YER175W-AYER175W-A 165 nt2.05□□□□□ -2.08
DDC1Q08949 ACB1YGR037C 264 nt2.05□□□□□ -2.08
DDC1Q08949 DFG10YIL049W 762 nt2.05□□□□□ -2.08
DDC1Q08949 YLR255CYLR255C 354 nt2.05□□□□□ -2.08
DDC1Q08949 YLR302CYLR302C 363 nt2.05□□□□□ -2.08
DDC1Q08949 YOR364WYOR364W 369 nt2.05□□□□□ -2.08
DDC1Q08949 TSA2YDR453C 591 nt2.04□□□□□ -2.08
DDC1Q08949 SDC1YDR469W 528 nt2.04□□□□□ -2.08
DDC1Q08949 YER172C-AYER172C-A 381 nt2.04□□□□□ -2.08
DDC1Q08949 YFR016CYFR016C 3702 nt2.04□□□□□ -2.08
DDC1Q08949 TWF1YGR080W 999 nt2.04□□□□□ -2.08
DDC1Q08949 YGR290WYGR290W 444 nt2.04□□□□□ -2.08
DDC1Q08949 CIC1YHR052W 1131 nt2.04□□□□□ -2.08
DDC1Q08949 ECM25YJL201W 1800 nt2.04□□□□□ -2.08
DDC1Q08949 NUP100YKL068W 2880 nt2.04□□□□□ -2.08
DDC1Q08949 YLR252WYLR252W 306 nt2.04□□□□□ -2.08
DDC1Q08949 ECM5YMR176W 4236 nt2.04□□□□□ -2.08
DDC1Q08949 YMR320WYMR320W 306 nt2.04□□□□□ -2.08
DDC1Q08949 TRS20YBR254C 528 nt2.04□□□□□ -2.08
DDC1Q08949 PHR1YOR386W 1698 nt2.03□□□□□ -2.08
DDC1Q08949 SNU56YDR240C 1479 nt2.03□□□□□ -2.08
DDC1Q08949 YDR199WYDR199W 366 nt2.03□□□□□ -2.08
DDC1Q08949 HRI1YLR301W 735 nt2.03□□□□□ -2.08
DDC1Q08949 YLR456WYLR456W 615 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 50.7 ms