Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 YGR161W-AYGR161W-A 1317 nt1.96□□□□□ -2.1
CLP1Q08685 YBL100W-AYBL100W-A 1317 nt1.96□□□□□ -2.1
CLP1Q08685 YCL020WYCL020W 1317 nt1.96□□□□□ -2.1
CLP1Q08685 YLR035C-AYLR035C-A 3468 nt1.96□□□□□ -2.1
CLP1Q08685 MIC19YFR011C 513 nt1.96□□□□□ -2.1
CLP1Q08685 PRP21YJL203W 843 nt1.96□□□□□ -2.1
CLP1Q08685 ATG38YLR211C 681 nt1.96□□□□□ -2.1
CLP1Q08685 YLR271WYLR271W 825 nt1.96□□□□□ -2.1
CLP1Q08685 YNL235CYNL235C 432 nt1.96□□□□□ -2.1
CLP1Q08685 MF(ALPHA)1YPL187W 498 nt1.96□□□□□ -2.1
CLP1Q08685 ASI3YNL008C 2031 nt1.95□□□□□ -2.1
CLP1Q08685 CDC60YPL160W 3273 nt1.95□□□□□ -2.1
CLP1Q08685 PRP38YGR075C 729 nt1.95□□□□□ -2.1
CLP1Q08685 YHR210CYHR210C 1026 nt1.95□□□□□ -2.1
CLP1Q08685 YIR020C-BYIR020C-B 735 nt1.95□□□□□ -2.1
CLP1Q08685 RPS16AYMR143W 432 nt1.95□□□□□ -2.1
CLP1Q08685 YMR254CYMR254C 309 nt1.95□□□□□ -2.1
CLP1Q08685 YBR051WYBR051W 351 nt1.95□□□□□ -2.1
CLP1Q08685 YPR089WYPR089W 2667 nt1.95□□□□□ -2.1
CLP1Q08685 YNL144CYNL144C 2223 nt1.95□□□□□ -2.1
CLP1Q08685 GAL80YML051W 1308 nt1.94□□□□□ -2.1
CLP1Q08685 TRL1YJL087C 2484 nt1.94□□□□□ -2.1
CLP1Q08685 SRB4YER022W 2064 nt1.94□□□□□ -2.1
CLP1Q08685 HCS1YKL017C 2052 nt1.94□□□□□ -2.1
CLP1Q08685 YIL012WYIL012W 342 nt1.94□□□□□ -2.1
CLP1Q08685 ECM9YKR004C 1134 nt1.94□□□□□ -2.1
CLP1Q08685 GIM3YNL153C 390 nt1.94□□□□□ -2.1
CLP1Q08685 YOL029CYOL029C 606 nt1.94□□□□□ -2.1
CLP1Q08685 YPL039WYPL039W 951 nt1.94□□□□□ -2.1
CLP1Q08685 YPR170CYPR170C 336 nt1.94□□□□□ -2.1
CLP1Q08685 15S_rRNA15S_rRNA 1649 nt1.94□□□□□ -2.1
CLP1Q08685 SSF2YDR312W 1362 nt1.94□□□□□ -2.1
CLP1Q08685 MES1YGR264C 2256 nt1.93□□□□□ -2.1
CLP1Q08685 PKH3YDR466W 2697 nt1.93□□□□□ -2.1
CLP1Q08685 YER091C-AYER091C-A 222 nt1.93□□□□□ -2.1
CLP1Q08685 RPL16BYNL069C 597 nt1.93□□□□□ -2.1
CLP1Q08685 YBR062CYBR062C 543 nt1.93□□□□□ -2.1
CLP1Q08685 MUD1YBR119W 897 nt1.93□□□□□ -2.1
CLP1Q08685 COG3YER157W 2406 nt1.93□□□□□ -2.1
CLP1Q08685 MFB1YDR219C 1398 nt1.93□□□□□ -2.1
CLP1Q08685 SFB2YNL049C 2631 nt1.93□□□□□ -2.1
CLP1Q08685 SHS1YDL225W 1656 nt1.93□□□□□ -2.1
CLP1Q08685 MAL33YBR297W 1407 nt1.92□□□□□ -2.1
CLP1Q08685 YDR018CYDR018C 1191 nt1.92□□□□□ -2.1
CLP1Q08685 ADK1YDR226W 669 nt1.92□□□□□ -2.1
CLP1Q08685 TMA20YER007C-A 546 nt1.92□□□□□ -2.1
CLP1Q08685 CKA1YIL035C 1119 nt1.92□□□□□ -2.1
CLP1Q08685 YJL119CYJL119C 324 nt1.92□□□□□ -2.1
CLP1Q08685 YJR087WYJR087W 351 nt1.92□□□□□ -2.1
CLP1Q08685 SRP21YKL122C 504 nt1.92□□□□□ -2.1
CLP1Q08685 VPS63YLR261C 327 nt1.92□□□□□ -2.1
CLP1Q08685 YBL012CYBL012C 402 nt1.92□□□□□ -2.1
CLP1Q08685 YML084WYML084W 309 nt1.92□□□□□ -2.1
CLP1Q08685 HSH155YMR288W 2916 nt1.92□□□□□ -2.1
CLP1Q08685 YDR338CYDR338C 2088 nt1.92□□□□□ -2.1
CLP1Q08685 MMS22YLR320W 4365 nt1.91□□□□□ -2.1
CLP1Q08685 MYO2YOR326W 4725 nt1.91□□□□□ -2.1
CLP1Q08685 YCR090CYCR090C 549 nt1.91□□□□□ -2.1
CLP1Q08685 snR9snR9 187 nt1.91□□□□□ -2.1
CLP1Q08685 DAD1YDR016C 285 nt1.91□□□□□ -2.1
CLP1Q08685 YDR115WYDR115W 318 nt1.91□□□□□ -2.1
CLP1Q08685 YDR461C-AYDR461C-A 243 nt1.91□□□□□ -2.1
CLP1Q08685 TDA2YER071C 381 nt1.91□□□□□ -2.1
CLP1Q08685 CSM4YPL200W 471 nt1.91□□□□□ -2.1
CLP1Q08685 GPI17YDR434W 1605 nt1.91□□□□□ -2.1
CLP1Q08685 YJL016WYJL016W 1686 nt1.9□□□□□ -2.1
CLP1Q08685 NUP192YJL039C 5052 nt1.9□□□□□ -2.1
CLP1Q08685 OCA6YDR067C 675 nt1.9□□□□□ -2.11
CLP1Q08685 NCB2YDR397C 441 nt1.9□□□□□ -2.11
CLP1Q08685 YGR109W-AYGR109W-A 873 nt1.9□□□□□ -2.11
CLP1Q08685 YIL082WYIL082W 873 nt1.9□□□□□ -2.11
CLP1Q08685 CSI1YMR025W 888 nt1.9□□□□□ -2.11
CLP1Q08685 SAR1YPL218W 573 nt1.9□□□□□ -2.11
CLP1Q08685 YPR145C-AYPR145C-A 237 nt1.9□□□□□ -2.11
CLP1Q08685 YJR098CYJR098C 1971 nt1.9□□□□□ -2.11
CLP1Q08685 YDR029WYDR029W 315 nt1.89□□□□□ -2.11
CLP1Q08685 GLC7YER133W 939 nt1.89□□□□□ -2.11
CLP1Q08685 FAR7YFR008W 666 nt1.89□□□□□ -2.11
CLP1Q08685 SDL1YIL167W 633 nt1.89□□□□□ -2.11
CLP1Q08685 BUD19YJL188C 309 nt1.89□□□□□ -2.11
CLP1Q08685 MIX23YBL107C 591 nt1.89□□□□□ -2.11
CLP1Q08685 HEM4YOR278W 828 nt1.89□□□□□ -2.11
CLP1Q08685 YBR277CYBR277C 402 nt1.89□□□□□ -2.11
CLP1Q08685 ARP7YPR034W 1434 nt1.89□□□□□ -2.11
CLP1Q08685 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
CLP1Q08685 EMC4YGL231C 573 nt1.88□□□□□ -2.11
CLP1Q08685 VMA21YGR105W 234 nt1.88□□□□□ -2.11
CLP1Q08685 ANS1YHR126C 480 nt1.88□□□□□ -2.11
CLP1Q08685 COX8YLR395C 237 nt1.88□□□□□ -2.11
CLP1Q08685 GMC2YLR445W 567 nt1.88□□□□□ -2.11
CLP1Q08685 PDP3YLR455W 915 nt1.88□□□□□ -2.11
CLP1Q08685 RRT16YNL105W 429 nt1.88□□□□□ -2.11
CLP1Q08685 YPR014CYPR014C 330 nt1.88□□□□□ -2.11
CLP1Q08685 IRC20YLR247C 4671 nt1.88□□□□□ -2.11
CLP1Q08685 MEC1YBR136W 7107 nt1.88□□□□□ -2.11
CLP1Q08685 KAR9YPL269W 1935 nt1.87□□□□□ -2.11
CLP1Q08685 GCN2YDR283C 4980 nt1.87□□□□□ -2.11
CLP1Q08685 SSF1YHR066W 1362 nt1.87□□□□□ -2.11
CLP1Q08685 YDL118WYDL118W 381 nt1.87□□□□□ -2.11
CLP1Q08685 SLX9YGR081C 633 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms