Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKB2Q00653 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 POU5F1P4-201ENST00000413175 1085 ntBASIC20.25■□□□□ 0.83
NFKB2Q00653 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKB2Q00653 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.25■□□□□ 0.83
NFKB2Q00653 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NFKB2Q00653 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NFKB2Q00653 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NFKB2Q00653 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB2Q00653 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NFKB2Q00653 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.24■□□□□ 0.83
NFKB2Q00653 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NFKB2Q00653 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 FAM201B-201ENST00000458407 597 ntBASIC20.24■□□□□ 0.83
NFKB2Q00653 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.24■□□□□ 0.83
NFKB2Q00653 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.24■□□□□ 0.83
NFKB2Q00653 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.24■□□□□ 0.83
NFKB2Q00653 AC008687.6-201ENST00000596318 630 ntBASIC20.24■□□□□ 0.83
NFKB2Q00653 AC008175.2-201ENST00000612840 297 ntBASIC20.24■□□□□ 0.83
NFKB2Q00653 AL050303.2-201ENST00000619798 666 ntBASIC20.24■□□□□ 0.83
NFKB2Q00653 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
NFKB2Q00653 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.24■□□□□ 0.83
NFKB2Q00653 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB2Q00653 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB2Q00653 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NFKB2Q00653 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB2Q00653 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.23■□□□□ 0.83
NFKB2Q00653 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NFKB2Q00653 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.23■□□□□ 0.83
NFKB2Q00653 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
NFKB2Q00653 AL138781.1-201ENST00000566567 1274 ntBASIC20.23■□□□□ 0.83
NFKB2Q00653 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB2Q00653 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.23■□□□□ 0.83
NFKB2Q00653 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.23■□□□□ 0.83
NFKB2Q00653 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.22■□□□□ 0.83
NFKB2Q00653 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.22■□□□□ 0.83
NFKB2Q00653 AC083906.2-201ENST00000511578 360 ntBASIC20.22■□□□□ 0.83
NFKB2Q00653 AL121832.2-201ENST00000610979 668 ntBASIC20.22■□□□□ 0.83
NFKB2Q00653 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
NFKB2Q00653 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 FP700111.2-201ENST00000619190 1892 ntBASIC20.22■□□□□ 0.83
NFKB2Q00653 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NFKB2Q00653 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB2Q00653 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB2Q00653 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.21■□□□□ 0.83
NFKB2Q00653 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.21■□□□□ 0.83
NFKB2Q00653 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.21■□□□□ 0.83
NFKB2Q00653 AC138907.5-202ENST00000569484 235 ntBASIC20.21■□□□□ 0.83
NFKB2Q00653 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.21■□□□□ 0.83
NFKB2Q00653 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NFKB2Q00653 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NFKB2Q00653 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB2Q00653 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB2Q00653 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NFKB2Q00653 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB2Q00653 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB2Q00653 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB2Q00653 TSPY6P-201ENST00000448518 926 ntBASIC20.2■□□□□ 0.82
NFKB2Q00653 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.2■□□□□ 0.82
NFKB2Q00653 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.2■□□□□ 0.82
NFKB2Q00653 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB2Q00653 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
NFKB2Q00653 AL162377.1-201ENST00000618844 1793 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms