Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS1BP61024 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CKS1BP61024 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS1BP61024 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CKS1BP61024 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS1BP61024 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.25□□□□□ -0.13
CKS1BP61024 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CKS1BP61024 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 AC133637.1-201ENST00000624115 1537 ntBASIC14.25□□□□□ -0.13
CKS1BP61024 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CKS1BP61024 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS1BP61024 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.24□□□□□ -0.13
CKS1BP61024 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CKS1BP61024 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CKS1BP61024 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CKS1BP61024 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS1BP61024 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CKS1BP61024 FER1L4-210ENST00000615531 5998 ntBASIC14.24□□□□□ -0.13
CKS1BP61024 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.23□□□□□ -0.13
CKS1BP61024 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CKS1BP61024 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.23□□□□□ -0.13
CKS1BP61024 AL031602.1-201ENST00000633169 911 ntBASIC14.23□□□□□ -0.13
CKS1BP61024 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS1BP61024 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
CKS1BP61024 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CKS1BP61024 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS1BP61024 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS1BP61024 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CKS1BP61024 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 BX323043.1-201ENST00000641006 1765 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CKS1BP61024 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 PKD1P1-201ENST00000458669 6805 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 MIR6724-1-201ENST00000616420 92 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 MIR6724-2-201ENST00000616483 92 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 MIR6724-4-201ENST00000617390 92 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 MIR6724-3-201ENST00000622482 92 ntBASIC14.22□□□□□ -0.13
CKS1BP61024 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.22□□□□□ -0.13
CKS1BP61024 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CKS1BP61024 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS1BP61024 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS1BP61024 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS1BP61024 OXCT2P1-201ENST00000447263 1535 ntBASIC14.21□□□□□ -0.13
CKS1BP61024 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS1BP61024 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms