Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SRP54P61011 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SRP54P61011 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.2■□□□□ 0.82
SRP54P61011 UNC93B5-201ENST00000530315 699 ntBASIC20.2■□□□□ 0.82
SRP54P61011 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP54P61011 AC105020.6-201ENST00000621523 1217 ntBASIC20.2■□□□□ 0.82
SRP54P61011 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
SRP54P61011 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.2■□□□□ 0.82
SRP54P61011 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SRP54P61011 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.2■□□□□ 0.82
SRP54P61011 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SRP54P61011 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRP54P61011 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRP54P61011 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.19■□□□□ 0.82
SRP54P61011 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.19■□□□□ 0.82
SRP54P61011 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.19■□□□□ 0.82
SRP54P61011 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.19■□□□□ 0.82
SRP54P61011 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SRP54P61011 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.19■□□□□ 0.82
SRP54P61011 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRP54P61011 HLA-B-256ENST00000639848 1089 ntBASIC20.19■□□□□ 0.82
SRP54P61011 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRP54P61011 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
SRP54P61011 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SRP54P61011 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SRP54P61011 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP54P61011 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SRP54P61011 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP54P61011 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP54P61011 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP54P61011 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.18■□□□□ 0.82
SRP54P61011 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.18■□□□□ 0.82
SRP54P61011 AC060766.5-201ENST00000590539 871 ntBASIC20.18■□□□□ 0.82
SRP54P61011 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SRP54P61011 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.18■□□□□ 0.82
SRP54P61011 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRP54P61011 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SRP54P61011 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.18■□□□□ 0.82
SRP54P61011 AC087633.2-202ENST00000565166 1439 ntBASIC20.18■□□□□ 0.82
SRP54P61011 Z98882.1-201ENST00000622160 2253 ntBASIC20.18■□□□□ 0.82
SRP54P61011 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.17■□□□□ 0.82
SRP54P61011 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
SRP54P61011 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.17■□□□□ 0.82
SRP54P61011 AC008687.6-201ENST00000596318 630 ntBASIC20.17■□□□□ 0.82
SRP54P61011 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.17■□□□□ 0.82
SRP54P61011 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SRP54P61011 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SRP54P61011 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.17■□□□□ 0.82
SRP54P61011 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.17■□□□□ 0.82
SRP54P61011 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.17■□□□□ 0.82
SRP54P61011 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.16■□□□□ 0.82
SRP54P61011 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 PRORSD1P-201ENST00000295112 541 ntBASIC20.16■□□□□ 0.82
SRP54P61011 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SRP54P61011 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.16■□□□□ 0.82
SRP54P61011 PGM5P4-201ENST00000421970 445 ntBASIC20.16■□□□□ 0.82
SRP54P61011 AC026366.1-201ENST00000488803 879 ntBASIC20.16■□□□□ 0.82
SRP54P61011 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.16■□□□□ 0.82
SRP54P61011 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.16■□□□□ 0.82
SRP54P61011 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.16■□□□□ 0.82
SRP54P61011 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SRP54P61011 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.16■□□□□ 0.82
SRP54P61011 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRP54P61011 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRP54P61011 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.15■□□□□ 0.82
SRP54P61011 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRP54P61011 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.15■□□□□ 0.82
SRP54P61011 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRP54P61011 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms