Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM11AP58511 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SMIM11AP58511 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM11AP58511 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.83■□□□□ 0.61
SMIM11AP58511 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SMIM11AP58511 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.83■□□□□ 0.61
SMIM11AP58511 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM11AP58511 AC091305.1-201ENST00000479476 895 ntBASIC18.83■□□□□ 0.6
SMIM11AP58511 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM11AP58511 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM11AP58511 AL354811.1-201ENST00000610286 706 ntBASIC18.83■□□□□ 0.6
SMIM11AP58511 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM11AP58511 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM11AP58511 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMIM11AP58511 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
SMIM11AP58511 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM11AP58511 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SMIM11AP58511 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMIM11AP58511 AC096631.2-201ENST00000436136 790 ntBASIC18.82■□□□□ 0.6
SMIM11AP58511 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.82■□□□□ 0.6
SMIM11AP58511 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM11AP58511 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMIM11AP58511 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 KRT16P2-201ENST00000414673 1423 ntBASIC18.82■□□□□ 0.6
SMIM11AP58511 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SMIM11AP58511 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM11AP58511 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.81■□□□□ 0.6
SMIM11AP58511 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.81■□□□□ 0.6
SMIM11AP58511 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.81■□□□□ 0.6
SMIM11AP58511 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.81■□□□□ 0.6
SMIM11AP58511 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.81■□□□□ 0.6
SMIM11AP58511 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 AFG3L1P-217ENST00000557444 2447 ntBASIC18.81■□□□□ 0.6
SMIM11AP58511 PCDHAC2-203ENST00000615316 3011 ntBASIC18.81■□□□□ 0.6
SMIM11AP58511 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM11AP58511 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM11AP58511 AC008406.3-201ENST00000620001 1374 ntBASIC18.81■□□□□ 0.6
SMIM11AP58511 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.8■□□□□ 0.6
SMIM11AP58511 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.8■□□□□ 0.6
SMIM11AP58511 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SMIM11AP58511 TPRG1LP1-201ENST00000598702 760 ntBASIC18.8■□□□□ 0.6
SMIM11AP58511 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.8■□□□□ 0.6
SMIM11AP58511 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.8■□□□□ 0.6
SMIM11AP58511 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SMIM11AP58511 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SMIM11AP58511 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SMIM11AP58511 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM11AP58511 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMIM11AP58511 KRT87P-202ENST00000534226 1464 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMIM11AP58511 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM11AP58511 MIR939-201ENST00000401314 82 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 AC079140.4-201ENST00000507448 529 ntBASIC18.79■□□□□ 0.6
SMIM11AP58511 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.79■□□□□ 0.6
SMIM11AP58511 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.79■□□□□ 0.6
SMIM11AP58511 AC131212.1-201ENST00000613771 668 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms