Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.58■□□□□ 0.72
VSX2P58304 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VSX2P58304 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.58■□□□□ 0.72
VSX2P58304 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.58■□□□□ 0.72
VSX2P58304 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.58■□□□□ 0.72
VSX2P58304 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.58■□□□□ 0.72
VSX2P58304 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.58■□□□□ 0.72
VSX2P58304 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.58■□□□□ 0.72
VSX2P58304 AC092118.2-201ENST00000613495 667 ntBASIC19.58■□□□□ 0.72
VSX2P58304 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
VSX2P58304 AC005229.4-201ENST00000610085 2198 ntBASIC19.58■□□□□ 0.72
VSX2P58304 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VSX2P58304 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VSX2P58304 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VSX2P58304 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.57■□□□□ 0.72
VSX2P58304 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.57■□□□□ 0.72
VSX2P58304 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 KRT18P68-201ENST00000392293 1000 ntBASIC19.57■□□□□ 0.72
VSX2P58304 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VSX2P58304 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.57■□□□□ 0.72
VSX2P58304 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.57■□□□□ 0.72
VSX2P58304 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.57■□□□□ 0.72
VSX2P58304 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSX2P58304 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.57■□□□□ 0.72
VSX2P58304 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VSX2P58304 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.56■□□□□ 0.72
VSX2P58304 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.56■□□□□ 0.72
VSX2P58304 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.56■□□□□ 0.72
VSX2P58304 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.56■□□□□ 0.72
VSX2P58304 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.56■□□□□ 0.72
VSX2P58304 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.56■□□□□ 0.72
VSX2P58304 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.56■□□□□ 0.72
VSX2P58304 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VSX2P58304 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.56■□□□□ 0.72
VSX2P58304 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VSX2P58304 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.56■□□□□ 0.72
VSX2P58304 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSX2P58304 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VSX2P58304 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.55■□□□□ 0.72
VSX2P58304 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.55■□□□□ 0.72
VSX2P58304 AC073210.2-201ENST00000430369 194 ntBASIC19.55■□□□□ 0.72
VSX2P58304 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.55■□□□□ 0.72
VSX2P58304 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
VSX2P58304 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.55■□□□□ 0.72
VSX2P58304 AL589743.5-201ENST00000616611 1050 ntBASIC19.55■□□□□ 0.72
VSX2P58304 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VSX2P58304 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.55■□□□□ 0.72
VSX2P58304 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.54■□□□□ 0.72
VSX2P58304 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.54■□□□□ 0.72
VSX2P58304 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.54■□□□□ 0.72
VSX2P58304 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
VSX2P58304 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VSX2P58304 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VSX2P58304 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.54■□□□□ 0.72
VSX2P58304 DUSP5P2-201ENST00000426873 1033 ntBASIC19.54■□□□□ 0.72
VSX2P58304 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.54■□□□□ 0.72
VSX2P58304 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.54■□□□□ 0.72
VSX2P58304 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.54■□□□□ 0.72
VSX2P58304 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms