Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
POLR2JP52435 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2JP52435 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
POLR2JP52435 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR2JP52435 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR2JP52435 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR2JP52435 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2JP52435 AC091305.1-201ENST00000479476 895 ntBASIC19.56■□□□□ 0.72
POLR2JP52435 RARRES2P11-201ENST00000635158 484 ntBASIC19.56■□□□□ 0.72
POLR2JP52435 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
POLR2JP52435 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2JP52435 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2JP52435 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
POLR2JP52435 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
POLR2JP52435 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2JP52435 TCF3P1-201ENST00000423021 1937 ntBASIC19.55■□□□□ 0.72
POLR2JP52435 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2JP52435 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.55■□□□□ 0.72
POLR2JP52435 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2JP52435 AL354811.1-201ENST00000610286 706 ntBASIC19.55■□□□□ 0.72
POLR2JP52435 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
POLR2JP52435 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
POLR2JP52435 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
POLR2JP52435 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.54■□□□□ 0.72
POLR2JP52435 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 AL136967.2-201ENST00000623968 743 ntBASIC19.54■□□□□ 0.72
POLR2JP52435 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
POLR2JP52435 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
POLR2JP52435 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
POLR2JP52435 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
POLR2JP52435 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
POLR2JP52435 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
POLR2JP52435 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.53■□□□□ 0.72
POLR2JP52435 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 AC245052.3-201ENST00000450182 901 ntBASIC19.53■□□□□ 0.72
POLR2JP52435 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 KRT87P-202ENST00000534226 1464 ntBASIC19.53■□□□□ 0.72
POLR2JP52435 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.53■□□□□ 0.72
POLR2JP52435 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
POLR2JP52435 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
POLR2JP52435 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR2JP52435 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR2JP52435 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR2JP52435 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.52■□□□□ 0.72
POLR2JP52435 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.52■□□□□ 0.72
POLR2JP52435 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 AC079140.4-201ENST00000507448 529 ntBASIC19.52■□□□□ 0.72
POLR2JP52435 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
POLR2JP52435 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR2JP52435 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR2JP52435 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
POLR2JP52435 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.52■□□□□ 0.71
POLR2JP52435 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.52■□□□□ 0.71
POLR2JP52435 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 KRT16P2-201ENST00000414673 1423 ntBASIC19.51■□□□□ 0.71
POLR2JP52435 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2JP52435 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.51■□□□□ 0.71
POLR2JP52435 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.51■□□□□ 0.71
POLR2JP52435 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.51■□□□□ 0.71
POLR2JP52435 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2JP52435 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.51■□□□□ 0.71
POLR2JP52435 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
POLR2JP52435 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms