Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1P51610 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1P51610 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.94■□□□□ 0.46
HCFC1P51610 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HCFC1P51610 MIR1224-201ENST00000408193 85 ntBASIC17.94■□□□□ 0.46
HCFC1P51610 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1P51610 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.94■□□□□ 0.46
HCFC1P51610 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1P51610 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HCFC1P51610 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1P51610 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1P51610 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.94■□□□□ 0.46
HCFC1P51610 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1P51610 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1P51610 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HCFC1P51610 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1P51610 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.94■□□□□ 0.46
HCFC1P51610 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1P51610 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.94■□□□□ 0.46
HCFC1P51610 REXO1L12P-201ENST00000622156 912 ntBASIC17.94■□□□□ 0.46
HCFC1P51610 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.94■□□□□ 0.46
HCFC1P51610 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.93■□□□□ 0.46
HCFC1P51610 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.93■□□□□ 0.46
HCFC1P51610 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HCFC1P51610 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.93■□□□□ 0.46
HCFC1P51610 AC239809.2-201ENST00000415381 517 ntBASIC17.93■□□□□ 0.46
HCFC1P51610 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCFC1P51610 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.93■□□□□ 0.46
HCFC1P51610 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HCFC1P51610 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC1P51610 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HCFC1P51610 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.92■□□□□ 0.46
HCFC1P51610 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC1P51610 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.92■□□□□ 0.46
HCFC1P51610 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.92■□□□□ 0.46
HCFC1P51610 AC233702.5-201ENST00000584107 538 ntBASIC17.92■□□□□ 0.46
HCFC1P51610 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.92■□□□□ 0.46
HCFC1P51610 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCFC1P51610 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
HCFC1P51610 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HCFC1P51610 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HCFC1P51610 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.91■□□□□ 0.46
HCFC1P51610 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC1P51610 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 ECEL1P1-201ENST00000373592 1742 ntBASIC17.91■□□□□ 0.46
HCFC1P51610 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC1P51610 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCFC1P51610 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.91■□□□□ 0.46
HCFC1P51610 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HCFC1P51610 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.91■□□□□ 0.46
HCFC1P51610 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HCFC1P51610 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCFC1P51610 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms