Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 ZNRF2P3-201ENST00000424200 374 ntBASIC19.8■□□□□ 0.76
KRT6CP48668 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT6CP48668 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT6CP48668 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KRT6CP48668 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT6CP48668 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT6CP48668 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KRT6CP48668 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6CP48668 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
KRT6CP48668 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KRT6CP48668 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
KRT6CP48668 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6CP48668 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KRT6CP48668 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KRT6CP48668 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.79■□□□□ 0.76
KRT6CP48668 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6CP48668 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT6CP48668 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6CP48668 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
KRT6CP48668 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6CP48668 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 KRT19P1-201ENST00000405746 1186 ntBASIC19.78■□□□□ 0.76
KRT6CP48668 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT6CP48668 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT6CP48668 SLC7A5P1-201ENST00000568957 537 ntBASIC19.78■□□□□ 0.76
KRT6CP48668 AC243732.1-201ENST00000612648 864 ntBASIC19.78■□□□□ 0.76
KRT6CP48668 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT6CP48668 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6CP48668 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT6CP48668 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT6CP48668 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT6CP48668 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
KRT6CP48668 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
KRT6CP48668 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT6CP48668 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KRT6CP48668 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KRT6CP48668 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6CP48668 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT6CP48668 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.75
KRT6CP48668 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.77■□□□□ 0.75
KRT6CP48668 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
KRT6CP48668 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6CP48668 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 AC092720.2-201ENST00000602388 1665 ntBASIC19.76■□□□□ 0.75
KRT6CP48668 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT6CP48668 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6CP48668 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT6CP48668 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT6CP48668 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6CP48668 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KRT6CP48668 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KRT6CP48668 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6CP48668 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6CP48668 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms