Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 HFA1YMR207C 6372 nt4.24□□□□□ -1.73
TY1A-JR2P47099 MDM20YOL076W 2391 nt4.24□□□□□ -1.73
TY1A-JR2P47099 DOA1YKL213C 2148 nt4.23□□□□□ -1.73
TY1A-JR2P47099 TRX1YLR043C 312 nt4.23□□□□□ -1.73
TY1A-JR2P47099 LSM7YNL147W 348 nt4.23□□□□□ -1.73
TY1A-JR2P47099 FUN12YAL035W 3009 nt4.23□□□□□ -1.73
TY1A-JR2P47099 YJL181WYJL181W 1836 nt4.23□□□□□ -1.73
TY1A-JR2P47099 KIC1YHR102W 3243 nt4.23□□□□□ -1.73
TY1A-JR2P47099 VPS54YDR027C 2670 nt4.22□□□□□ -1.73
TY1A-JR2P47099 MUS81YDR386W 1899 nt4.22□□□□□ -1.73
TY1A-JR2P47099 snR74snR74 88 nt4.22□□□□□ -1.73
TY1A-JR2P47099 YJL022WYJL022W 309 nt4.22□□□□□ -1.73
TY1A-JR2P47099 YKL165C-AYKL165C-A 234 nt4.22□□□□□ -1.73
TY1A-JR2P47099 YGR237CYGR237C 2358 nt4.22□□□□□ -1.73
TY1A-JR2P47099 ETP1YHL010C 1758 nt4.22□□□□□ -1.73
TY1A-JR2P47099 BRO1YPL084W 2535 nt4.22□□□□□ -1.73
TY1A-JR2P47099 NCL1YBL024W 2055 nt4.22□□□□□ -1.73
TY1A-JR2P47099 GCN20YFR009W 2259 nt4.21□□□□□ -1.73
TY1A-JR2P47099 CAF130YGR134W 3369 nt4.21□□□□□ -1.74
TY1A-JR2P47099 AIM11YER093C-A 414 nt4.21□□□□□ -1.74
TY1A-JR2P47099 RLM1YPL089C 2031 nt4.21□□□□□ -1.74
TY1A-JR2P47099 YNL034WYNL034W 1839 nt4.21□□□□□ -1.74
TY1A-JR2P47099 DFG16YOR030W 1860 nt4.2□□□□□ -1.74
TY1A-JR2P47099 PMP3YDR276C 168 nt4.2□□□□□ -1.74
TY1A-JR2P47099 RPL33BYOR234C 324 nt4.2□□□□□ -1.74
TY1A-JR2P47099 SRP72YPL210C 1923 nt4.2□□□□□ -1.74
TY1A-JR2P47099 GMC1YDR506C 1827 nt4.2□□□□□ -1.74
TY1A-JR2P47099 MUK1YPL070W 1839 nt4.2□□□□□ -1.74
TY1A-JR2P47099 YPL260WYPL260W 1656 nt4.19□□□□□ -1.74
TY1A-JR2P47099 GAL10YBR019C 2100 nt4.19□□□□□ -1.74
TY1A-JR2P47099 YDL034WYDL034W 345 nt4.19□□□□□ -1.74
TY1A-JR2P47099 SMT3YDR510W 306 nt4.19□□□□□ -1.74
TY1A-JR2P47099 SSQ1YLR369W 1974 nt4.19□□□□□ -1.74
TY1A-JR2P47099 OLE1YGL055W 1533 nt4.19□□□□□ -1.74
TY1A-JR2P47099 GDE1YPL110C 3672 nt4.19□□□□□ -1.74
TY1A-JR2P47099 NSP1YJL041W 2472 nt4.18□□□□□ -1.74
TY1A-JR2P47099 PMP1YCR024C-A 123 nt4.18□□□□□ -1.74
TY1A-JR2P47099 COX23YHR116W 456 nt4.18□□□□□ -1.74
TY1A-JR2P47099 POG1YIL122W 1056 nt4.18□□□□□ -1.74
TY1A-JR2P47099 YLR255CYLR255C 354 nt4.18□□□□□ -1.74
TY1A-JR2P47099 RPS7AYOR096W 573 nt4.18□□□□□ -1.74
TY1A-JR2P47099 YBR121C-AYBR121C-A 159 nt4.18□□□□□ -1.74
TY1A-JR2P47099 GYL1YMR192W 2163 nt4.18□□□□□ -1.74
TY1A-JR2P47099 RAD54YGL163C 2697 nt4.17□□□□□ -1.74
TY1A-JR2P47099 YCR047W-AYCR047W-A 207 nt4.17□□□□□ -1.74
TY1A-JR2P47099 COX26YDR119W-A 201 nt4.17□□□□□ -1.74
TY1A-JR2P47099 GIS2YNL255C 462 nt4.17□□□□□ -1.74
TY1A-JR2P47099 YBR099CYBR099C 384 nt4.17□□□□□ -1.74
TY1A-JR2P47099 ASG1YIL130W 2895 nt4.17□□□□□ -1.74
TY1A-JR2P47099 SNU114YKL173W 3027 nt4.17□□□□□ -1.74
TY1A-JR2P47099 DOA4YDR069C 2781 nt4.17□□□□□ -1.74
TY1A-JR2P47099 PFK1YGR240C 2964 nt4.17□□□□□ -1.74
TY1A-JR2P47099 SPT21YMR179W 2277 nt4.16□□□□□ -1.74
TY1A-JR2P47099 SPO21YOL091W 1830 nt4.16□□□□□ -1.74
TY1A-JR2P47099 NPR1YNL183C 2373 nt4.16□□□□□ -1.74
TY1A-JR2P47099 YHL006W-AYHL006W-A 354 nt4.16□□□□□ -1.74
TY1A-JR2P47099 ECM12YHR021W-A 456 nt4.16□□□□□ -1.74
TY1A-JR2P47099 YDR089WYDR089W 2610 nt4.16□□□□□ -1.74
TY1A-JR2P47099 SSB1YDL229W 1842 nt4.16□□□□□ -1.74
TY1A-JR2P47099 SSB2YNL209W 1842 nt4.16□□□□□ -1.74
TY1A-JR2P47099 SIP3YNL257C 3690 nt4.15□□□□□ -1.74
TY1A-JR2P47099 BRP1YGL007W 378 nt4.15□□□□□ -1.75
TY1A-JR2P47099 EMP24YGL200C 612 nt4.15□□□□□ -1.75
TY1A-JR2P47099 ABF1YKL112W 2196 nt4.14□□□□□ -1.75
TY1A-JR2P47099 21S_rRNA21S_rRNA 3296 nt4.14□□□□□ -1.75
TY1A-JR2P47099 FAP1YNL023C 2898 nt4.14□□□□□ -1.75
TY1A-JR2P47099 SKG6YHR149C 2205 nt4.14□□□□□ -1.75
TY1A-JR2P47099 COX14YML129C 213 nt4.13□□□□□ -1.75
TY1A-JR2P47099 YDL176WYDL176W 2127 nt4.12□□□□□ -1.75
TY1A-JR2P47099 TMN3YER113C 2121 nt4.12□□□□□ -1.75
TY1A-JR2P47099 VAC7YNL054W 3498 nt4.12□□□□□ -1.75
TY1A-JR2P47099 RPL6AYML073C 531 nt4.12□□□□□ -1.75
TY1A-JR2P47099 FPR1YNL135C 345 nt4.12□□□□□ -1.75
TY1A-JR2P47099 MSD1YPL104W 1977 nt4.11□□□□□ -1.75
TY1A-JR2P47099 MSH2YOL090W 2895 nt4.11□□□□□ -1.75
TY1A-JR2P47099 CDC15YAR019C 2925 nt4.11□□□□□ -1.75
TY1A-JR2P47099 NUP2YLR335W 2163 nt4.11□□□□□ -1.75
TY1A-JR2P47099 CDC20YGL116W 1833 nt4.11□□□□□ -1.75
TY1A-JR2P47099 ZDS1YMR273C 2748 nt4.1□□□□□ -1.75
TY1A-JR2P47099 YPR003CYPR003C 2265 nt4.1□□□□□ -1.75
TY1A-JR2P47099 YAK1YJL141C 2424 nt4.1□□□□□ -1.75
TY1A-JR2P47099 QCR7YDR529C 384 nt4.1□□□□□ -1.75
TY1A-JR2P47099 YHL015W-AYHL015W-A 84 nt4.1□□□□□ -1.75
TY1A-JR2P47099 YIR044CYIR044C 186 nt4.1□□□□□ -1.75
TY1A-JR2P47099 SOD1YJR104C 465 nt4.1□□□□□ -1.75
TY1A-JR2P47099 SPB1YCL054W 2526 nt4.1□□□□□ -1.75
TY1A-JR2P47099 CFT2YLR115W 2580 nt4.09□□□□□ -1.75
TY1A-JR2P47099 SKT5YBL061C 2091 nt4.09□□□□□ -1.75
TY1A-JR2P47099 YOR102WYOR102W 351 nt4.09□□□□□ -1.75
TY1A-JR2P47099 NHP6AYPR052C 282 nt4.09□□□□□ -1.75
TY1A-JR2P47099 ALK2YBL009W 2031 nt4.09□□□□□ -1.76
TY1A-JR2P47099 YKL050CYKL050C 2769 nt4.08□□□□□ -1.76
TY1A-JR2P47099 HSX1tR(CCU)J 72 nt4.08□□□□□ -1.76
TY1A-JR2P47099 BAS1YKR099W 2436 nt4.08□□□□□ -1.76
TY1A-JR2P47099 NOP53YPL146C 1368 nt4.08□□□□□ -1.76
TY1A-JR2P47099 FAA1YOR317W 2103 nt4.07□□□□□ -1.76
TY1A-JR2P47099 YDR341CYDR341C 1824 nt4.07□□□□□ -1.76
TY1A-JR2P47099 GUP1YGL084C 1683 nt4.07□□□□□ -1.76
TY1A-JR2P47099 RIA1YNL163C 3333 nt4.07□□□□□ -1.76
TY1A-JR2P47099 RPS17BYDR447C 411 nt4.07□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms