Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.26■□□□□ 0.99
MMP13P45452 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MMP13P45452 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP13P45452 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP13P45452 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MMP13P45452 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP13P45452 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
MMP13P45452 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.25■□□□□ 0.99
MMP13P45452 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.25■□□□□ 0.99
MMP13P45452 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
MMP13P45452 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.25■□□□□ 0.99
MMP13P45452 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP13P45452 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
MMP13P45452 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MMP13P45452 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 PCDHAC2-203ENST00000615316 3011 ntBASIC21.24■□□□□ 0.99
MMP13P45452 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.24■□□□□ 0.99
MMP13P45452 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP13P45452 AC016769.1-201ENST00000409132 1010 ntBASIC21.24■□□□□ 0.99
MMP13P45452 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.24■□□□□ 0.99
MMP13P45452 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.24■□□□□ 0.99
MMP13P45452 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP13P45452 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP13P45452 MYCNOS-205ENST00000641950 531 ntBASIC21.24■□□□□ 0.99
MMP13P45452 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP13P45452 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.24■□□□□ 0.99
MMP13P45452 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP13P45452 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
MMP13P45452 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 PLK5-205ENST00000642079 1969 ntBASIC21.23■□□□□ 0.99
MMP13P45452 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP13P45452 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP13P45452 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MMP13P45452 KRT18P11-201ENST00000435214 1283 ntBASIC21.23■□□□□ 0.99
MMP13P45452 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP13P45452 SLC7A5P1-201ENST00000568957 537 ntBASIC21.23■□□□□ 0.99
MMP13P45452 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.23■□□□□ 0.99
MMP13P45452 AC022517.1-201ENST00000592429 346 ntBASIC21.23■□□□□ 0.99
MMP13P45452 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.23■□□□□ 0.99
MMP13P45452 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MMP13P45452 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP13P45452 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.22■□□□□ 0.99
MMP13P45452 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.22■□□□□ 0.99
MMP13P45452 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.22■□□□□ 0.99
MMP13P45452 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.22■□□□□ 0.99
MMP13P45452 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.22■□□□□ 0.99
MMP13P45452 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MMP13P45452 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP13P45452 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP13P45452 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MMP13P45452 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP13P45452 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.21■□□□□ 0.99
MMP13P45452 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MMP13P45452 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MMP13P45452 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP13P45452 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.21■□□□□ 0.99
MMP13P45452 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP13P45452 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms