Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 EFT2YDR385W 2529 nt5.66□□□□□ -1.5
PTP3P40048 EFT1YOR133W 2529 nt5.66□□□□□ -1.5
PTP3P40048 PMP2YEL017C-A 132 nt5.66□□□□□ -1.5
PTP3P40048 USE1YGL098W 738 nt5.66□□□□□ -1.5
PTP3P40048 POG1YIL122W 1056 nt5.66□□□□□ -1.5
PTP3P40048 YNL067W-BYNL067W-B 141 nt5.66□□□□□ -1.5
PTP3P40048 TRZ1YKR079C 2517 nt5.66□□□□□ -1.5
PTP3P40048 EMP24YGL200C 612 nt5.65□□□□□ -1.5
PTP3P40048 YHL006W-AYHL006W-A 354 nt5.65□□□□□ -1.5
PTP3P40048 YIL058WYIL058W 285 nt5.65□□□□□ -1.5
PTP3P40048 YKL165C-AYKL165C-A 234 nt5.65□□□□□ -1.5
PTP3P40048 ARO80YDR421W 2853 nt5.65□□□□□ -1.51
PTP3P40048 KEL2YGR238C 2649 nt5.64□□□□□ -1.51
PTP3P40048 CWH43YCR017C 2862 nt5.64□□□□□ -1.51
PTP3P40048 YEL045CYEL045C 426 nt5.64□□□□□ -1.51
PTP3P40048 MSD1YPL104W 1977 nt5.64□□□□□ -1.51
PTP3P40048 GYP7YDL234C 2241 nt5.63□□□□□ -1.51
PTP3P40048 YLR416CYLR416C 399 nt5.63□□□□□ -1.51
PTP3P40048 PHO81YGR233C 3537 nt5.63□□□□□ -1.51
PTP3P40048 KIP3YGL216W 2418 nt5.63□□□□□ -1.51
PTP3P40048 KRE6YPR159W 2163 nt5.62□□□□□ -1.51
PTP3P40048 GDE1YPL110C 3672 nt5.62□□□□□ -1.51
PTP3P40048 SNC2YOR327C 348 nt5.62□□□□□ -1.51
PTP3P40048 YPR092WYPR092W 306 nt5.62□□□□□ -1.51
PTP3P40048 GUP1YGL084C 1683 nt5.62□□□□□ -1.51
PTP3P40048 ARK1YNL020C 1917 nt5.62□□□□□ -1.51
PTP3P40048 ACC1YNR016C 6702 nt5.61□□□□□ -1.51
PTP3P40048 NMA111YNL123W 2994 nt5.61□□□□□ -1.51
PTP3P40048 SPC105YGL093W 2754 nt5.61□□□□□ -1.51
PTP3P40048 FLO8YER109C 2400 nt5.6□□□□□ -1.51
PTP3P40048 NUP82YJL061W 2142 nt5.6□□□□□ -1.51
PTP3P40048 YJR112W-AYJR112W-A 330 nt5.6□□□□□ -1.51
PTP3P40048 UPS1YLR193C 528 nt5.6□□□□□ -1.51
PTP3P40048 EPS1YIL005W 2106 nt5.6□□□□□ -1.51
PTP3P40048 YPK1YKL126W 2043 nt5.59□□□□□ -1.51
PTP3P40048 tC(GCA)BtC(GCA)B 72 nt5.59□□□□□ -1.51
PTP3P40048 tC(GCA)GtC(GCA)G 72 nt5.59□□□□□ -1.51
PTP3P40048 tC(GCA)P1tC(GCA)P1 72 nt5.59□□□□□ -1.51
PTP3P40048 tC(GCA)P2tC(GCA)P2 72 nt5.59□□□□□ -1.51
PTP3P40048 YDR246W-AYDR246W-A 201 nt5.59□□□□□ -1.51
PTP3P40048 AIM11YER093C-A 414 nt5.59□□□□□ -1.51
PTP3P40048 RPS27AYKL156W 249 nt5.59□□□□□ -1.51
PTP3P40048 PUF6YDR496C 1971 nt5.58□□□□□ -1.52
PTP3P40048 TFB1YDR311W 1929 nt5.58□□□□□ -1.52
PTP3P40048 IOC3YFR013W 2364 nt5.58□□□□□ -1.52
PTP3P40048 YIR007WYIR007W 2295 nt5.58□□□□□ -1.52
PTP3P40048 DIS3YOL021C 3006 nt5.58□□□□□ -1.52
PTP3P40048 GPR1YDL035C 2886 nt5.58□□□□□ -1.52
PTP3P40048 YGR237CYGR237C 2358 nt5.58□□□□□ -1.52
PTP3P40048 PDR15YDR406W 4590 nt5.57□□□□□ -1.52
PTP3P40048 YOR1YGR281W 4434 nt5.56□□□□□ -1.52
PTP3P40048 APC2YLR127C 2562 nt5.56□□□□□ -1.52
PTP3P40048 SLM2YNL047C 1971 nt5.55□□□□□ -1.52
PTP3P40048 SRP72YPL210C 1923 nt5.55□□□□□ -1.52
PTP3P40048 YIL059CYIL059C 366 nt5.55□□□□□ -1.52
PTP3P40048 PRP43YGL120C 2304 nt5.54□□□□□ -1.52
PTP3P40048 PTA1YAL043C 2358 nt5.54□□□□□ -1.52
PTP3P40048 YDR286CYDR286C 345 nt5.54□□□□□ -1.52
PTP3P40048 YER121WYER121W 345 nt5.54□□□□□ -1.52
PTP3P40048 ULI1YFR026C 510 nt5.54□□□□□ -1.52
PTP3P40048 RRN6YBL014C 2685 nt5.54□□□□□ -1.52
PTP3P40048 CDC27YBL084C 2277 nt5.54□□□□□ -1.52
PTP3P40048 BRO1YPL084W 2535 nt5.53□□□□□ -1.52
PTP3P40048 SSQ1YLR369W 1974 nt5.53□□□□□ -1.52
PTP3P40048 IKI3YLR384C 4050 nt5.53□□□□□ -1.52
PTP3P40048 YHR182WYHR182W 2358 nt5.53□□□□□ -1.52
PTP3P40048 APC1YNL172W 5247 nt5.53□□□□□ -1.52
PTP3P40048 CDH1YGL003C 1701 nt5.53□□□□□ -1.52
PTP3P40048 TCP1YDR212W 1680 nt5.53□□□□□ -1.52
PTP3P40048 SPO21YOL091W 1830 nt5.53□□□□□ -1.52
PTP3P40048 PIG1YLR273C 1947 nt5.52□□□□□ -1.53
PTP3P40048 YNR065CYNR065C 3351 nt5.52□□□□□ -1.53
PTP3P40048 CSC1YLR241W 2349 nt5.52□□□□□ -1.53
PTP3P40048 AKL1YBR059C 3327 nt5.52□□□□□ -1.53
PTP3P40048 snR74snR74 88 nt5.52□□□□□ -1.53
PTP3P40048 YDR193WYDR193W 399 nt5.52□□□□□ -1.53
PTP3P40048 IES6YEL044W 501 nt5.52□□□□□ -1.53
PTP3P40048 YJL022WYJL022W 309 nt5.52□□□□□ -1.53
PTP3P40048 RPS7AYOR096W 573 nt5.52□□□□□ -1.53
PTP3P40048 YPR053CYPR053C 456 nt5.52□□□□□ -1.53
PTP3P40048 VPS54YDR027C 2670 nt5.52□□□□□ -1.53
PTP3P40048 NUP120YKL057C 3114 nt5.52□□□□□ -1.53
PTP3P40048 SSS1YDR086C 243 nt5.51□□□□□ -1.53
PTP3P40048 YLR255CYLR255C 354 nt5.51□□□□□ -1.53
PTP3P40048 RPL33BYOR234C 324 nt5.51□□□□□ -1.53
PTP3P40048 YDL176WYDL176W 2127 nt5.51□□□□□ -1.53
PTP3P40048 SPB1YCL054W 2526 nt5.5□□□□□ -1.53
PTP3P40048 snR79snR79 84 nt5.5□□□□□ -1.53
PTP3P40048 TRX1YLR043C 312 nt5.5□□□□□ -1.53
PTP3P40048 VHS3YOR054C 2025 nt5.5□□□□□ -1.53
PTP3P40048 SSY5YJL156C 2100 nt5.5□□□□□ -1.53
PTP3P40048 PMP1YCR024C-A 123 nt5.49□□□□□ -1.53
PTP3P40048 RPL6AYML073C 531 nt5.49□□□□□ -1.53
PTP3P40048 RPB10YOR210W 213 nt5.49□□□□□ -1.53
PTP3P40048 RPS23BYPR132W 438 nt5.49□□□□□ -1.53
PTP3P40048 GLT1YDL171C 6438 nt5.48□□□□□ -1.53
PTP3P40048 YJL181WYJL181W 1836 nt5.48□□□□□ -1.53
PTP3P40048 CIN1YOR349W 3045 nt5.48□□□□□ -1.53
PTP3P40048 ERP6YGL002W 651 nt5.48□□□□□ -1.53
PTP3P40048 BRP1YGL007W 378 nt5.48□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms