Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 tW(CCA)MtW(CCA)M 72 nt2.48□□□□□ -2.01
VPS52P39904 tW(CCA)PtW(CCA)P 72 nt2.48□□□□□ -2.01
VPS52P39904 RPL37AYLR185W 267 nt2.48□□□□□ -2.01
VPS52P39904 YOR248WYOR248W 303 nt2.48□□□□□ -2.01
VPS52P39904 LCL1YPL056C 306 nt2.48□□□□□ -2.01
VPS52P39904 YOL057WYOL057W 2136 nt2.48□□□□□ -2.01
VPS52P39904 NUM1YDR150W 8247 nt2.48□□□□□ -2.01
VPS52P39904 YPL150WYPL150W 2706 nt2.48□□□□□ -2.01
VPS52P39904 GPI17YDR434W 1605 nt2.47□□□□□ -2.01
VPS52P39904 DPB11YJL090C 2295 nt2.47□□□□□ -2.01
VPS52P39904 YER079WYER079W 633 nt2.47□□□□□ -2.01
VPS52P39904 BAT1YHR208W 1182 nt2.47□□□□□ -2.01
VPS52P39904 YIL174WYIL174W 228 nt2.47□□□□□ -2.01
VPS52P39904 YJL222W-AYJL222W-A 228 nt2.47□□□□□ -2.01
VPS52P39904 YJR023CYJR023C 402 nt2.47□□□□□ -2.01
VPS52P39904 RPB11YOL005C 363 nt2.47□□□□□ -2.01
VPS52P39904 YOL159CYOL159C 516 nt2.47□□□□□ -2.01
VPS52P39904 TRA1YHR099W 11235 nt2.47□□□□□ -2.01
VPS52P39904 BCK1YJL095W 4437 nt2.47□□□□□ -2.01
VPS52P39904 SPB1YCL054W 2526 nt2.46□□□□□ -2.01
VPS52P39904 YBR012W-AYBR012W-A 1323 nt2.46□□□□□ -2.02
VPS52P39904 YOR142W-AYOR142W-A 1323 nt2.46□□□□□ -2.02
VPS52P39904 YPR158W-AYPR158W-A 1323 nt2.46□□□□□ -2.02
VPS52P39904 ESC1YMR219W 4977 nt2.46□□□□□ -2.02
VPS52P39904 RPS17BYDR447C 411 nt2.46□□□□□ -2.02
VPS52P39904 HPA3YEL066W 540 nt2.46□□□□□ -2.02
VPS52P39904 YER087C-AYER087C-A 552 nt2.46□□□□□ -2.02
VPS52P39904 YIL030W-AYIL030W-A 339 nt2.46□□□□□ -2.02
VPS52P39904 DGK1YOR311C 873 nt2.46□□□□□ -2.02
VPS52P39904 YBR032WYBR032W 303 nt2.46□□□□□ -2.02
VPS52P39904 NFT1YKR103W 3657 nt2.46□□□□□ -2.02
VPS52P39904 APC2YLR127C 2562 nt2.46□□□□□ -2.02
VPS52P39904 MDM32YOR147W 1869 nt2.45□□□□□ -2.02
VPS52P39904 RLF2YPR018W 1821 nt2.45□□□□□ -2.02
VPS52P39904 RNH70YGR276C 1662 nt2.45□□□□□ -2.02
VPS52P39904 YJR079WYJR079W 330 nt2.45□□□□□ -2.02
VPS52P39904 YOR293C-AYOR293C-A 150 nt2.45□□□□□ -2.02
VPS52P39904 TSC3YBR058C-A 243 nt2.45□□□□□ -2.02
VPS52P39904 RPO41YFL036W 4056 nt2.45□□□□□ -2.02
VPS52P39904 AXL1YPR122W 3627 nt2.45□□□□□ -2.02
VPS52P39904 UTP14YML093W 2700 nt2.45□□□□□ -2.02
VPS52P39904 CAF120YNL278W 3183 nt2.45□□□□□ -2.02
VPS52P39904 LEU3YLR451W 2661 nt2.44□□□□□ -2.02
VPS52P39904 TIM11YDR322C-A 291 nt2.44□□□□□ -2.02
VPS52P39904 FYV4YHR059W 393 nt2.44□□□□□ -2.02
VPS52P39904 SIP18YMR175W 240 nt2.44□□□□□ -2.02
VPS52P39904 TRM2YKR056W 1920 nt2.44□□□□□ -2.02
VPS52P39904 PDR3YBL005W 2931 nt2.44□□□□□ -2.02
VPS52P39904 AYT1YLL063C 1425 nt2.43□□□□□ -2.02
VPS52P39904 YNL034WYNL034W 1839 nt2.43□□□□□ -2.02
VPS52P39904 YGL165CYGL165C 579 nt2.43□□□□□ -2.02
VPS52P39904 YHR138CYHR138C 345 nt2.43□□□□□ -2.02
VPS52P39904 TPM2YIL138C 486 nt2.43□□□□□ -2.02
VPS52P39904 YJR140W-AYJR140W-A 150 nt2.43□□□□□ -2.02
VPS52P39904 TEN1YLR010C 483 nt2.43□□□□□ -2.02
VPS52P39904 YML084WYML084W 309 nt2.43□□□□□ -2.02
VPS52P39904 ESF2YNR054C 951 nt2.43□□□□□ -2.02
VPS52P39904 MMS1YPR164W 4224 nt2.43□□□□□ -2.02
VPS52P39904 ROY1YMR258C 1662 nt2.43□□□□□ -2.02
VPS52P39904 ECM5YMR176W 4236 nt2.43□□□□□ -2.02
VPS52P39904 IKI3YLR384C 4050 nt2.42□□□□□ -2.02
VPS52P39904 RGR1YLR071C 3249 nt2.42□□□□□ -2.02
VPS52P39904 SWF1YDR126W 1011 nt2.42□□□□□ -2.02
VPS52P39904 YDR194W-AYDR194W-A 153 nt2.42□□□□□ -2.02
VPS52P39904 PEP8YJL053W 1140 nt2.42□□□□□ -2.02
VPS52P39904 YAR047CYAR047C 321 nt2.42□□□□□ -2.02
VPS52P39904 URA10YMR271C 684 nt2.42□□□□□ -2.02
VPS52P39904 SWM2YNR004W 441 nt2.42□□□□□ -2.02
VPS52P39904 CDC33YOL139C 642 nt2.42□□□□□ -2.02
VPS52P39904 YOR392WYOR392W 444 nt2.42□□□□□ -2.02
VPS52P39904 SLM6YBR266C 453 nt2.42□□□□□ -2.02
VPS52P39904 YEL018C-AYEL018C-A 534 nt2.41□□□□□ -2.02
VPS52P39904 YER189WYER189W 369 nt2.41□□□□□ -2.02
VPS52P39904 RPL14BYHL001W 417 nt2.41□□□□□ -2.02
VPS52P39904 CRG1YHR209W 876 nt2.41□□□□□ -2.02
VPS52P39904 YIL054WYIL054W 318 nt2.41□□□□□ -2.02
VPS52P39904 YAL026C-AYAL026C-A 438 nt2.41□□□□□ -2.02
VPS52P39904 YKL111CYKL111C 336 nt2.41□□□□□ -2.02
VPS52P39904 YOR029WYOR029W 336 nt2.41□□□□□ -2.02
VPS52P39904 YOR053WYOR053W 342 nt2.41□□□□□ -2.02
VPS52P39904 YBR285WYBR285W 435 nt2.41□□□□□ -2.02
VPS52P39904 NEW1YPL226W 3591 nt2.41□□□□□ -2.02
VPS52P39904 NDD1YOR372C 1665 nt2.41□□□□□ -2.02
VPS52P39904 YIL166CYIL166C 1629 nt2.4□□□□□ -2.03
VPS52P39904 ADK1YDR226W 669 nt2.4□□□□□ -2.03
VPS52P39904 YHR214W-AYHR214W-A 486 nt2.4□□□□□ -2.03
VPS52P39904 IRC19YLL033W 693 nt2.4□□□□□ -2.03
VPS52P39904 YAL068W-AYAL068W-A 255 nt2.4□□□□□ -2.03
VPS52P39904 YAR068WYAR068W 486 nt2.4□□□□□ -2.03
VPS52P39904 PEX17YNL214W 600 nt2.4□□□□□ -2.03
VPS52P39904 YOL134CYOL134C 390 nt2.4□□□□□ -2.03
VPS52P39904 snR43snR43 209 nt2.4□□□□□ -2.03
VPS52P39904 DAS1YJL149W 1992 nt2.4□□□□□ -2.03
VPS52P39904 SEC26YDR238C 2922 nt2.39□□□□□ -2.03
VPS52P39904 SSY1YDR160W 2559 nt2.39□□□□□ -2.03
VPS52P39904 YIL058WYIL058W 285 nt2.39□□□□□ -2.03
VPS52P39904 RPL36BYPL249C-A 303 nt2.39□□□□□ -2.03
VPS52P39904 PSK2YOL045W 3306 nt2.39□□□□□ -2.03
VPS52P39904 NAB3YPL190C 2409 nt2.39□□□□□ -2.03
VPS52P39904 NPR3YHL023C 3441 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms