Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AL157384.1-201ENST00000445995 2473 ntBASIC21.49■■□□□ 1.03
PCK1P35558 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.49■■□□□ 1.03
PCK1P35558 AC027702.1-201ENST00000563810 1770 ntBASIC21.48■■□□□ 1.03
PCK1P35558 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.48■■□□□ 1.03
PCK1P35558 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCK1P35558 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCK1P35558 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.48■■□□□ 1.03
PCK1P35558 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.48■■□□□ 1.03
PCK1P35558 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCK1P35558 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.48■■□□□ 1.03
PCK1P35558 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCK1P35558 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.48■■□□□ 1.03
PCK1P35558 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.48■■□□□ 1.03
PCK1P35558 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.48■■□□□ 1.03
PCK1P35558 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.48■■□□□ 1.03
PCK1P35558 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCK1P35558 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCK1P35558 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.48■■□□□ 1.03
PCK1P35558 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCK1P35558 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.47■■□□□ 1.03
PCK1P35558 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCK1P35558 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCK1P35558 LINC01521-201ENST00000504184 1943 ntBASIC21.47■■□□□ 1.03
PCK1P35558 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.47■■□□□ 1.03
PCK1P35558 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.47■■□□□ 1.03
PCK1P35558 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.47■■□□□ 1.03
PCK1P35558 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.47■■□□□ 1.03
PCK1P35558 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.47■■□□□ 1.03
PCK1P35558 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCK1P35558 AP005212.1-201ENST00000581547 1997 ntBASIC21.47■■□□□ 1.03
PCK1P35558 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCK1P35558 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCK1P35558 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCK1P35558 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 KRT18P11-201ENST00000435214 1283 ntBASIC21.46■■□□□ 1.03
PCK1P35558 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.46■■□□□ 1.03
PCK1P35558 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.46■■□□□ 1.03
PCK1P35558 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCK1P35558 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCK1P35558 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCK1P35558 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.45■■□□□ 1.03
PCK1P35558 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.45■■□□□ 1.03
PCK1P35558 FP700111.2-201ENST00000619190 1892 ntBASIC21.45■■□□□ 1.02
PCK1P35558 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCK1P35558 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.45■■□□□ 1.02
PCK1P35558 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.45■■□□□ 1.02
PCK1P35558 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.45■■□□□ 1.02
PCK1P35558 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCK1P35558 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCK1P35558 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 GABARAPL3-202ENST00000624044 1851 ntBASIC21.45■■□□□ 1.02
PCK1P35558 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.45■■□□□ 1.02
PCK1P35558 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCK1P35558 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.44■■□□□ 1.02
PCK1P35558 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.44■■□□□ 1.02
PCK1P35558 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCK1P35558 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
PCK1P35558 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCK1P35558 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCK1P35558 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.44■■□□□ 1.02
PCK1P35558 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms