Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.56■■□□□ 1.04
RFC1P35251 AP005212.1-201ENST00000581547 1997 ntBASIC21.56■■□□□ 1.04
RFC1P35251 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFC1P35251 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.56■■□□□ 1.04
RFC1P35251 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC1P35251 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC1P35251 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 AC007322.3-201ENST00000426526 701 ntBASIC21.55■■□□□ 1.04
RFC1P35251 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.55■■□□□ 1.04
RFC1P35251 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC1P35251 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC1P35251 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC1P35251 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.55■■□□□ 1.04
RFC1P35251 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFC1P35251 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.55■■□□□ 1.04
RFC1P35251 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RFC1P35251 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.54■■□□□ 1.04
RFC1P35251 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.54■■□□□ 1.04
RFC1P35251 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.54■■□□□ 1.04
RFC1P35251 DUX4L16-201ENST00000555130 1264 ntBASIC21.54■■□□□ 1.04
RFC1P35251 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
RFC1P35251 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.54■■□□□ 1.04
RFC1P35251 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RFC1P35251 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.54■■□□□ 1.04
RFC1P35251 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFC1P35251 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
RFC1P35251 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFC1P35251 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RFC1P35251 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFC1P35251 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RFC1P35251 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.53■■□□□ 1.04
RFC1P35251 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC1P35251 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
RFC1P35251 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.53■■□□□ 1.04
RFC1P35251 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.53■■□□□ 1.04
RFC1P35251 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.53■■□□□ 1.04
RFC1P35251 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.53■■□□□ 1.04
RFC1P35251 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.53■■□□□ 1.04
RFC1P35251 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC1P35251 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
RFC1P35251 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RFC1P35251 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC1P35251 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.52■■□□□ 1.04
RFC1P35251 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC1P35251 LINC01521-201ENST00000504184 1943 ntBASIC21.52■■□□□ 1.04
RFC1P35251 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RFC1P35251 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC1P35251 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RFC1P35251 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RFC1P35251 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.52■■□□□ 1.03
RFC1P35251 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFC1P35251 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC1P35251 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC1P35251 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC1P35251 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFC1P35251 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RFC1P35251 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC1P35251 CNN2P6-201ENST00000439038 900 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms