Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHC1P29353 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC1P29353 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SHC1P29353 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SHC1P29353 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC1P29353 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC1P29353 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.71■□□□□ 0.59
SHC1P29353 AC243732.1-201ENST00000612648 864 ntBASIC18.71■□□□□ 0.59
SHC1P29353 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC1P29353 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHC1P29353 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.71■□□□□ 0.59
SHC1P29353 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SHC1P29353 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SHC1P29353 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SHC1P29353 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SHC1P29353 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 AC091799.1-201ENST00000422823 811 ntBASIC18.7■□□□□ 0.58
SHC1P29353 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC1P29353 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.7■□□□□ 0.58
SHC1P29353 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC1P29353 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC1P29353 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.7■□□□□ 0.58
SHC1P29353 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC1P29353 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
SHC1P29353 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHC1P29353 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SHC1P29353 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SHC1P29353 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SHC1P29353 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC1P29353 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.69■□□□□ 0.58
SHC1P29353 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SHC1P29353 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SHC1P29353 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SHC1P29353 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHC1P29353 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.68■□□□□ 0.58
SHC1P29353 AC013268.1-206ENST00000638368 961 ntBASIC18.68■□□□□ 0.58
SHC1P29353 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 AC112229.1-201ENST00000639295 961 ntBASIC18.68■□□□□ 0.58
SHC1P29353 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
SHC1P29353 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SHC1P29353 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.68■□□□□ 0.58
SHC1P29353 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHC1P29353 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SHC1P29353 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SHC1P29353 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC1P29353 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHC1P29353 AC090192.1-201ENST00000517740 490 ntBASIC18.67■□□□□ 0.58
SHC1P29353 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms