Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GDF1P27539 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.59■□□□□ 0.57
GDF1P27539 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GDF1P27539 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.58■□□□□ 0.57
GDF1P27539 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.58■□□□□ 0.57
GDF1P27539 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDF1P27539 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.58■□□□□ 0.57
GDF1P27539 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDF1P27539 AC087633.2-202ENST00000565166 1439 ntBASIC18.58■□□□□ 0.57
GDF1P27539 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDF1P27539 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GDF1P27539 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GDF1P27539 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.58■□□□□ 0.56
GDF1P27539 TSPY20P-201ENST00000450910 630 ntBASIC18.58■□□□□ 0.56
GDF1P27539 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.58■□□□□ 0.56
GDF1P27539 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.58■□□□□ 0.56
GDF1P27539 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.58■□□□□ 0.56
GDF1P27539 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.58■□□□□ 0.56
GDF1P27539 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GDF1P27539 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.58■□□□□ 0.56
GDF1P27539 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
GDF1P27539 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GDF1P27539 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 FEM1AP4-201ENST00000443167 1987 ntBASIC18.57■□□□□ 0.56
GDF1P27539 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
GDF1P27539 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.57■□□□□ 0.56
GDF1P27539 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 ABHD17AP1-201ENST00000358206 933 ntBASIC18.57■□□□□ 0.56
GDF1P27539 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.57■□□□□ 0.56
GDF1P27539 MIR4651-201ENST00000582622 73 ntBASIC18.57■□□□□ 0.56
GDF1P27539 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
GDF1P27539 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GDF1P27539 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GDF1P27539 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.56■□□□□ 0.56
GDF1P27539 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.56■□□□□ 0.56
GDF1P27539 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
GDF1P27539 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
GDF1P27539 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GDF1P27539 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.56■□□□□ 0.56
GDF1P27539 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.55■□□□□ 0.56
GDF1P27539 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.55■□□□□ 0.56
GDF1P27539 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GDF1P27539 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.55■□□□□ 0.56
GDF1P27539 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.55■□□□□ 0.56
GDF1P27539 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.55■□□□□ 0.56
GDF1P27539 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.55■□□□□ 0.56
GDF1P27539 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.55■□□□□ 0.56
GDF1P27539 FAM201B-201ENST00000458407 597 ntBASIC18.55■□□□□ 0.56
GDF1P27539 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GDF1P27539 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 AC121338.2-201ENST00000622535 1744 ntBASIC18.54■□□□□ 0.56
GDF1P27539 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GDF1P27539 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GDF1P27539 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms