Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF1P18846 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATF1P18846 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.94■□□□□ 0.46
ATF1P18846 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.94■□□□□ 0.46
ATF1P18846 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATF1P18846 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATF1P18846 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.94■□□□□ 0.46
ATF1P18846 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATF1P18846 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
ATF1P18846 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATF1P18846 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ATF1P18846 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ATF1P18846 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATF1P18846 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ATF1P18846 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.93■□□□□ 0.46
ATF1P18846 AL136967.2-201ENST00000623968 743 ntBASIC17.93■□□□□ 0.46
ATF1P18846 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.93■□□□□ 0.46
ATF1P18846 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.93■□□□□ 0.46
ATF1P18846 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ATF1P18846 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATF1P18846 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ATF1P18846 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 TCF3P1-201ENST00000423021 1937 ntBASIC17.92■□□□□ 0.46
ATF1P18846 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATF1P18846 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.92■□□□□ 0.46
ATF1P18846 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.92■□□□□ 0.46
ATF1P18846 AC116562.4-201ENST00000641316 2276 ntBASIC17.92■□□□□ 0.46
ATF1P18846 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.92■□□□□ 0.46
ATF1P18846 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATF1P18846 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATF1P18846 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.92■□□□□ 0.46
ATF1P18846 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.92■□□□□ 0.46
ATF1P18846 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.92■□□□□ 0.46
ATF1P18846 AC012414.1-201ENST00000556676 535 ntBASIC17.92■□□□□ 0.46
ATF1P18846 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.92■□□□□ 0.46
ATF1P18846 AL031432.3-201ENST00000607698 485 ntBASIC17.92■□□□□ 0.46
ATF1P18846 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ATF1P18846 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATF1P18846 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATF1P18846 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.91■□□□□ 0.46
ATF1P18846 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
ATF1P18846 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
ATF1P18846 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.91■□□□□ 0.46
ATF1P18846 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 EEF1DP3-203ENST00000566025 782 ntBASIC17.91■□□□□ 0.46
ATF1P18846 AC053503.5-201ENST00000601508 636 ntBASIC17.91■□□□□ 0.46
ATF1P18846 AC018445.3-201ENST00000624177 1945 ntBASIC17.91■□□□□ 0.46
ATF1P18846 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.91■□□□□ 0.46
ATF1P18846 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
ATF1P18846 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.91■□□□□ 0.46
ATF1P18846 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATF1P18846 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ATF1P18846 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
ATF1P18846 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ATF1P18846 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATF1P18846 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATF1P18846 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATF1P18846 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ATF1P18846 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATF1P18846 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATF1P18846 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
ATF1P18846 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.9■□□□□ 0.46
ATF1P18846 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATF1P18846 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms