Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 AC027682.1-201ENST00000562846 899 ntBASIC17.34■□□□□ 0.37
HIST1H1DP16402 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.34■□□□□ 0.37
HIST1H1DP16402 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIST1H1DP16402 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HIST1H1DP16402 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HIST1H1DP16402 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H1DP16402 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIST1H1DP16402 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
HIST1H1DP16402 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 AC008175.2-201ENST00000612840 297 ntBASIC17.33■□□□□ 0.36
HIST1H1DP16402 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIST1H1DP16402 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.33■□□□□ 0.36
HIST1H1DP16402 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 SMG8-203ENST00000578922 2178 ntBASIC17.32■□□□□ 0.36
HIST1H1DP16402 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 MIR572-201ENST00000384983 95 ntBASIC17.32■□□□□ 0.36
HIST1H1DP16402 POU5F1P4-201ENST00000413175 1085 ntBASIC17.32■□□□□ 0.36
HIST1H1DP16402 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIST1H1DP16402 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.32■□□□□ 0.36
HIST1H1DP16402 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.31■□□□□ 0.36
HIST1H1DP16402 RNF165-205ENST00000588679 2904 ntBASIC17.31■□□□□ 0.36
HIST1H1DP16402 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIST1H1DP16402 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
HIST1H1DP16402 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIST1H1DP16402 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
HIST1H1DP16402 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms