Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 MCRIP2P1-201ENST00000394346 511 ntBASIC19.45■□□□□ 0.7
ZNF888P0CJ79 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 AC100791.3-201ENST00000617619 330 ntBASIC19.45■□□□□ 0.7
ZNF888P0CJ79 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF888P0CJ79 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 MIR2861-201ENST00000636310 90 ntBASIC19.44■□□□□ 0.7
ZNF888P0CJ79 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 AC007225.1-201ENST00000566331 1836 ntBASIC19.44■□□□□ 0.7
ZNF888P0CJ79 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF888P0CJ79 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ZNF888P0CJ79 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 AC087633.2-202ENST00000565166 1439 ntBASIC19.42■□□□□ 0.7
ZNF888P0CJ79 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 TSPY6P-201ENST00000448518 926 ntBASIC19.42■□□□□ 0.7
ZNF888P0CJ79 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 CYP2T3P-201ENST00000601990 817 ntBASIC19.42■□□□□ 0.7
ZNF888P0CJ79 AL109923.1-201ENST00000618799 583 ntBASIC19.42■□□□□ 0.7
ZNF888P0CJ79 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF888P0CJ79 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF888P0CJ79 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms