Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.62■□□□□ 0.57
FREM3P0C091 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FREM3P0C091 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.62■□□□□ 0.57
FREM3P0C091 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM3P0C091 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM3P0C091 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FREM3P0C091 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM3P0C091 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FREM3P0C091 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FREM3P0C091 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FREM3P0C091 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM3P0C091 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM3P0C091 MIR2861-201ENST00000636310 90 ntBASIC18.61■□□□□ 0.57
FREM3P0C091 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.6■□□□□ 0.57
FREM3P0C091 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.6■□□□□ 0.57
FREM3P0C091 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
FREM3P0C091 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FREM3P0C091 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
FREM3P0C091 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.6■□□□□ 0.57
FREM3P0C091 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
FREM3P0C091 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
FREM3P0C091 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.6■□□□□ 0.57
FREM3P0C091 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM3P0C091 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FREM3P0C091 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.59■□□□□ 0.57
FREM3P0C091 TSPY20P-201ENST00000450910 630 ntBASIC18.59■□□□□ 0.57
FREM3P0C091 FAM21FP-204ENST00000608637 956 ntBASIC18.59■□□□□ 0.57
FREM3P0C091 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FREM3P0C091 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
FREM3P0C091 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.59■□□□□ 0.57
FREM3P0C091 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.59■□□□□ 0.57
FREM3P0C091 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.59■□□□□ 0.57
FREM3P0C091 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.59■□□□□ 0.57
FREM3P0C091 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.59■□□□□ 0.57
FREM3P0C091 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.59■□□□□ 0.57
FREM3P0C091 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.59■□□□□ 0.57
FREM3P0C091 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.59■□□□□ 0.57
FREM3P0C091 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FREM3P0C091 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM3P0C091 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
FREM3P0C091 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
FREM3P0C091 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 MIPEPP3-201ENST00000412105 444 ntBASIC18.58■□□□□ 0.57
FREM3P0C091 AC097658.1-201ENST00000475555 843 ntBASIC18.58■□□□□ 0.57
FREM3P0C091 CD99P1-205ENST00000527459 561 ntBASIC18.58■□□□□ 0.57
FREM3P0C091 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.58■□□□□ 0.57
FREM3P0C091 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM3P0C091 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.58■□□□□ 0.57
FREM3P0C091 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FREM3P0C091 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM3P0C091 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FREM3P0C091 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FREM3P0C091 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.58■□□□□ 0.56
FREM3P0C091 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM3P0C091 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.58■□□□□ 0.56
FREM3P0C091 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM3P0C091 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.58■□□□□ 0.56
FREM3P0C091 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM3P0C091 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
FREM3P0C091 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM3P0C091 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms