Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.8■■□□□ 1.08
RB1P06400 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 CD177P1-201ENST00000606252 935 ntBASIC21.8■■□□□ 1.08
RB1P06400 AC026471.5-201ENST00000615068 467 ntBASIC21.8■■□□□ 1.08
RB1P06400 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RB1P06400 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RB1P06400 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.8■■□□□ 1.08
RB1P06400 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.79■■□□□ 1.08
RB1P06400 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RB1P06400 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.79■■□□□ 1.08
RB1P06400 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.79■■□□□ 1.08
RB1P06400 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RB1P06400 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.79■■□□□ 1.08
RB1P06400 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RB1P06400 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.78■■□□□ 1.08
RB1P06400 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RB1P06400 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.78■■□□□ 1.08
RB1P06400 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.78■■□□□ 1.08
RB1P06400 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 AL353708.3-201ENST00000610272 989 ntBASIC21.78■■□□□ 1.08
RB1P06400 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RB1P06400 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.78■■□□□ 1.08
RB1P06400 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
RB1P06400 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
RB1P06400 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RB1P06400 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RB1P06400 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
RB1P06400 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RB1P06400 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RB1P06400 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.77■■□□□ 1.08
RB1P06400 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RB1P06400 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RB1P06400 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.77■■□□□ 1.08
RB1P06400 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RB1P06400 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RB1P06400 MMP23A-201ENST00000234610 1017 ntBASIC21.76■■□□□ 1.07
RB1P06400 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 AL355355.2-201ENST00000442321 338 ntBASIC21.76■■□□□ 1.07
RB1P06400 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.76■■□□□ 1.07
RB1P06400 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.76■■□□□ 1.07
RB1P06400 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RB1P06400 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.76■■□□□ 1.07
RB1P06400 AP003071.4-201ENST00000562276 1284 ntBASIC21.76■■□□□ 1.07
RB1P06400 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.76■■□□□ 1.07
RB1P06400 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.76■■□□□ 1.07
RB1P06400 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RB1P06400 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.76■■□□□ 1.07
RB1P06400 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RB1P06400 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.75■■□□□ 1.07
RB1P06400 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.75■■□□□ 1.07
RB1P06400 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.75■■□□□ 1.07
RB1P06400 TMPOP1-202ENST00000424642 1267 ntBASIC21.75■■□□□ 1.07
RB1P06400 AL353807.1-201ENST00000427475 662 ntBASIC21.75■■□□□ 1.07
RB1P06400 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.75■■□□□ 1.07
RB1P06400 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.75■■□□□ 1.07
RB1P06400 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RB1P06400 AL121829.2-201ENST00000620908 328 ntBASIC21.75■■□□□ 1.07
RB1P06400 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms