Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TOP3BO95985 AL391422.3-201ENST00000603791 2761 ntBASIC20.91■□□□□ 0.94
TOP3BO95985 PLK5-205ENST00000642079 1969 ntBASIC20.91■□□□□ 0.94
TOP3BO95985 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP3BO95985 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP3BO95985 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TOP3BO95985 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.9■□□□□ 0.94
TOP3BO95985 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.9■□□□□ 0.94
TOP3BO95985 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 MIPEPP3-201ENST00000412105 444 ntBASIC20.9■□□□□ 0.94
TOP3BO95985 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.9■□□□□ 0.94
TOP3BO95985 AC142381.4-202ENST00000563973 229 ntBASIC20.9■□□□□ 0.94
TOP3BO95985 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOP3BO95985 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TOP3BO95985 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP3BO95985 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
TOP3BO95985 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TOP3BO95985 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TOP3BO95985 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.89■□□□□ 0.94
TOP3BO95985 KRT87P-202ENST00000534226 1464 ntBASIC20.89■□□□□ 0.94
TOP3BO95985 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TOP3BO95985 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TOP3BO95985 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TOP3BO95985 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TOP3BO95985 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TOP3BO95985 ESRRAP1-201ENST00000400596 1257 ntBASIC20.89■□□□□ 0.93
TOP3BO95985 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.89■□□□□ 0.93
TOP3BO95985 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TOP3BO95985 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.89■□□□□ 0.93
TOP3BO95985 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.89■□□□□ 0.93
TOP3BO95985 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TOP3BO95985 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP3BO95985 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 AC073314.1-201ENST00000568729 2216 ntBASIC20.88■□□□□ 0.93
TOP3BO95985 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP3BO95985 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
TOP3BO95985 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.88■□□□□ 0.93
TOP3BO95985 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP3BO95985 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP3BO95985 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.88■□□□□ 0.93
TOP3BO95985 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.88■□□□□ 0.93
TOP3BO95985 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOP3BO95985 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP3BO95985 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TOP3BO95985 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TOP3BO95985 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.87■□□□□ 0.93
TOP3BO95985 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TOP3BO95985 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.87■□□□□ 0.93
TOP3BO95985 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.87■□□□□ 0.93
TOP3BO95985 AP001160.3-201ENST00000601484 763 ntBASIC20.87■□□□□ 0.93
TOP3BO95985 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.87■□□□□ 0.93
TOP3BO95985 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.87■□□□□ 0.93
TOP3BO95985 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TOP3BO95985 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
TOP3BO95985 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOP3BO95985 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP3BO95985 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 MIR1224-201ENST00000408193 85 ntBASIC20.86■□□□□ 0.93
TOP3BO95985 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TOP3BO95985 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.86■□□□□ 0.93
TOP3BO95985 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms