Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CNOT4O95628 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CNOT4O95628 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT4O95628 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.15■□□□□ 0.5
CNOT4O95628 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 MIR4651-201ENST00000582622 73 ntBASIC18.15■□□□□ 0.5
CNOT4O95628 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.15■□□□□ 0.5
CNOT4O95628 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CNOT4O95628 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CNOT4O95628 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT4O95628 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT4O95628 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT4O95628 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.14■□□□□ 0.5
CNOT4O95628 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT4O95628 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CNOT4O95628 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT4O95628 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT4O95628 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 AC069152.1-201ENST00000438030 544 ntBASIC18.14■□□□□ 0.49
CNOT4O95628 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT4O95628 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT4O95628 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT4O95628 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.14■□□□□ 0.49
CNOT4O95628 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT4O95628 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CNOT4O95628 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT4O95628 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT4O95628 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CNOT4O95628 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 AC138932.1-201ENST00000534164 6830 ntBASIC18.13■□□□□ 0.49
CNOT4O95628 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNOT4O95628 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.13■□□□□ 0.49
CNOT4O95628 PGM5P4-201ENST00000421970 445 ntBASIC18.13■□□□□ 0.49
CNOT4O95628 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT4O95628 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT4O95628 CYP2T3P-201ENST00000601990 817 ntBASIC18.13■□□□□ 0.49
CNOT4O95628 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNOT4O95628 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT4O95628 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.13■□□□□ 0.49
CNOT4O95628 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 AC011484.1-201ENST00000377652 1995 ntBASIC18.13■□□□□ 0.49
CNOT4O95628 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT4O95628 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CNOT4O95628 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT4O95628 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNOT4O95628 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT4O95628 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNOT4O95628 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT4O95628 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT4O95628 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.12■□□□□ 0.49
CNOT4O95628 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT4O95628 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT4O95628 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT4O95628 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT4O95628 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms