Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.41■■□□□ 1.98
LTN1O94822 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC27.41■■□□□ 1.98
LTN1O94822 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
LTN1O94822 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.4■■□□□ 1.98
LTN1O94822 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC27.4■■□□□ 1.98
LTN1O94822 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC27.4■■□□□ 1.98
LTN1O94822 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27.4■■□□□ 1.98
LTN1O94822 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
LTN1O94822 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 ABHD17AP6-201ENST00000458502 1044 ntBASIC27.4■■□□□ 1.98
LTN1O94822 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
LTN1O94822 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
LTN1O94822 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.39■■□□□ 1.98
LTN1O94822 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
LTN1O94822 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
LTN1O94822 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
LTN1O94822 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LTN1O94822 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LTN1O94822 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
LTN1O94822 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LTN1O94822 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC27.38■■□□□ 1.97
LTN1O94822 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.38■■□□□ 1.97
LTN1O94822 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC27.38■■□□□ 1.97
LTN1O94822 AC113410.3-201ENST00000623366 203 ntBASIC27.38■■□□□ 1.97
LTN1O94822 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC27.38■■□□□ 1.97
LTN1O94822 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
LTN1O94822 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
LTN1O94822 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
LTN1O94822 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
LTN1O94822 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC27.37■■□□□ 1.97
LTN1O94822 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC27.37■■□□□ 1.97
LTN1O94822 Six3os1_6.1-201ENST00000620790 196 ntBASIC27.37■■□□□ 1.97
LTN1O94822 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LTN1O94822 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
LTN1O94822 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LTN1O94822 PALM-207ENST00000590161 2137 ntTSL 4 BASIC27.37■■□□□ 1.97
LTN1O94822 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.37■■□□□ 1.97
LTN1O94822 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LTN1O94822 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
LTN1O94822 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LTN1O94822 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.37■■□□□ 1.97
LTN1O94822 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC27.37■■□□□ 1.97
LTN1O94822 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
LTN1O94822 AC006557.6-201ENST00000623071 864 ntBASIC27.37■■□□□ 1.97
LTN1O94822 MIR2861-201ENST00000636310 90 ntBASIC27.37■■□□□ 1.97
LTN1O94822 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.36■■□□□ 1.97
LTN1O94822 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
LTN1O94822 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 PENK-204ENST00000518770 863 ntTSL 2 BASIC27.36■■□□□ 1.97
LTN1O94822 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC27.36■■□□□ 1.97
LTN1O94822 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC27.36■■□□□ 1.97
LTN1O94822 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC27.36■■□□□ 1.97
LTN1O94822 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
LTN1O94822 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
LTN1O94822 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.36■■□□□ 1.97
LTN1O94822 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
LTN1O94822 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
LTN1O94822 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
LTN1O94822 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
LTN1O94822 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LTN1O94822 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC27.35■■□□□ 1.97
LTN1O94822 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.35■■□□□ 1.97
LTN1O94822 AC120498.8-201ENST00000614275 531 ntBASIC27.35■■□□□ 1.97
LTN1O94822 SNX21-213ENST00000614929 587 ntTSL 5 BASIC27.35■■□□□ 1.97
LTN1O94822 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LTN1O94822 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
LTN1O94822 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.35■■□□□ 1.97
LTN1O94822 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
LTN1O94822 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC27.35■■□□□ 1.97
LTN1O94822 TK2-204ENST00000525974 1178 ntTSL 2 BASIC27.35■■□□□ 1.97
LTN1O94822 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
LTN1O94822 AC110285.5-201ENST00000611501 352 ntBASIC27.35■■□□□ 1.97
LTN1O94822 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LTN1O94822 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC27.34■■□□□ 1.97
LTN1O94822 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LTN1O94822 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC27.34■■□□□ 1.97
LTN1O94822 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
LTN1O94822 BRWD1-AS2-201ENST00000603064 1028 ntBASIC27.34■■□□□ 1.97
LTN1O94822 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC27.34■■□□□ 1.97
LTN1O94822 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms