Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFPL1O75677 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFPL1O75677 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFPL1O75677 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.54■□□□□ 0.88
RFPL1O75677 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.54■□□□□ 0.88
RFPL1O75677 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.54■□□□□ 0.88
RFPL1O75677 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFPL1O75677 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RFPL1O75677 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.53■□□□□ 0.88
RFPL1O75677 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.53■□□□□ 0.88
RFPL1O75677 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.53■□□□□ 0.88
RFPL1O75677 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.53■□□□□ 0.88
RFPL1O75677 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
RFPL1O75677 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.53■□□□□ 0.88
RFPL1O75677 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFPL1O75677 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.52■□□□□ 0.88
RFPL1O75677 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.52■□□□□ 0.88
RFPL1O75677 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RFPL1O75677 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
RFPL1O75677 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.52■□□□□ 0.88
RFPL1O75677 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFPL1O75677 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RFPL1O75677 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
RFPL1O75677 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFPL1O75677 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RFPL1O75677 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RFPL1O75677 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.51■□□□□ 0.87
RFPL1O75677 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
RFPL1O75677 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RFPL1O75677 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.51■□□□□ 0.87
RFPL1O75677 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.51■□□□□ 0.87
RFPL1O75677 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.51■□□□□ 0.87
RFPL1O75677 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.51■□□□□ 0.87
RFPL1O75677 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.51■□□□□ 0.87
RFPL1O75677 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFPL1O75677 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFPL1O75677 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RFPL1O75677 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.5■□□□□ 0.87
RFPL1O75677 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.5■□□□□ 0.87
RFPL1O75677 HLA-L-209ENST00000420110 1011 ntBASIC20.5■□□□□ 0.87
RFPL1O75677 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.5■□□□□ 0.87
RFPL1O75677 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFPL1O75677 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
RFPL1O75677 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.5■□□□□ 0.87
RFPL1O75677 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.5■□□□□ 0.87
RFPL1O75677 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFPL1O75677 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFPL1O75677 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.5■□□□□ 0.87
RFPL1O75677 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFPL1O75677 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RFPL1O75677 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.49■□□□□ 0.87
RFPL1O75677 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
RFPL1O75677 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RFPL1O75677 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
RFPL1O75677 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFPL1O75677 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.49■□□□□ 0.87
RFPL1O75677 AC016769.1-201ENST00000409132 1010 ntBASIC20.49■□□□□ 0.87
RFPL1O75677 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.49■□□□□ 0.87
RFPL1O75677 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.49■□□□□ 0.87
RFPL1O75677 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.49■□□□□ 0.87
RFPL1O75677 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms