Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CYTIPO60759 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CYTIPO60759 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.27■□□□□ 0.52
CYTIPO60759 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.27■□□□□ 0.52
CYTIPO60759 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.27■□□□□ 0.52
CYTIPO60759 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CYTIPO60759 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CYTIPO60759 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.27■□□□□ 0.51
CYTIPO60759 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CYTIPO60759 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CYTIPO60759 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYTIPO60759 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.26■□□□□ 0.51
CYTIPO60759 PGM5P4-201ENST00000421970 445 ntBASIC18.26■□□□□ 0.51
CYTIPO60759 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.26■□□□□ 0.51
CYTIPO60759 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYTIPO60759 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYTIPO60759 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CYTIPO60759 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYTIPO60759 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 AC087633.2-202ENST00000565166 1439 ntBASIC18.25■□□□□ 0.51
CYTIPO60759 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
CYTIPO60759 AL355472.2-201ENST00000422958 438 ntBASIC18.25■□□□□ 0.51
CYTIPO60759 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.25■□□□□ 0.51
CYTIPO60759 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
CYTIPO60759 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYTIPO60759 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.25■□□□□ 0.51
CYTIPO60759 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CYTIPO60759 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.24■□□□□ 0.51
CYTIPO60759 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYTIPO60759 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.24■□□□□ 0.51
CYTIPO60759 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYTIPO60759 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
CYTIPO60759 KRT18P68-201ENST00000392293 1000 ntBASIC18.24■□□□□ 0.51
CYTIPO60759 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYTIPO60759 BX276092.2-201ENST00000417668 665 ntBASIC18.24■□□□□ 0.51
CYTIPO60759 AC142086.2-201ENST00000569753 217 ntBASIC18.24■□□□□ 0.51
CYTIPO60759 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.24■□□□□ 0.51
CYTIPO60759 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.24■□□□□ 0.51
CYTIPO60759 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.24■□□□□ 0.51
CYTIPO60759 AC006128.1-201ENST00000624704 1661 ntBASIC18.24■□□□□ 0.51
CYTIPO60759 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYTIPO60759 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CYTIPO60759 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.24■□□□□ 0.51
CYTIPO60759 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.24■□□□□ 0.51
CYTIPO60759 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.23■□□□□ 0.51
CYTIPO60759 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.23■□□□□ 0.51
CYTIPO60759 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.23■□□□□ 0.51
CYTIPO60759 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.23■□□□□ 0.51
CYTIPO60759 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.23■□□□□ 0.51
CYTIPO60759 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 MIR2861-201ENST00000636310 90 ntBASIC18.23■□□□□ 0.51
CYTIPO60759 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CYTIPO60759 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.23■□□□□ 0.51
CYTIPO60759 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CYTIPO60759 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.23■□□□□ 0.51
CYTIPO60759 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CYTIPO60759 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CYTIPO60759 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CYTIPO60759 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms