Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.74■□□□□ 0.91
SMAD6O43541 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.74■□□□□ 0.91
SMAD6O43541 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.74■□□□□ 0.91
SMAD6O43541 AL356652.1-201ENST00000615962 565 ntBASIC20.74■□□□□ 0.91
SMAD6O43541 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD6O43541 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD6O43541 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMAD6O43541 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMAD6O43541 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.73■□□□□ 0.91
SMAD6O43541 TSPY20P-201ENST00000450910 630 ntBASIC20.73■□□□□ 0.91
SMAD6O43541 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.73■□□□□ 0.91
SMAD6O43541 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMAD6O43541 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.73■□□□□ 0.91
SMAD6O43541 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.73■□□□□ 0.91
SMAD6O43541 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.73■□□□□ 0.91
SMAD6O43541 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.73■□□□□ 0.91
SMAD6O43541 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 AL137060.1-201ENST00000618151 2648 ntBASIC20.73■□□□□ 0.91
SMAD6O43541 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMAD6O43541 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD6O43541 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD6O43541 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SMAD6O43541 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMAD6O43541 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SMAD6O43541 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
SMAD6O43541 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.72■□□□□ 0.91
SMAD6O43541 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.72■□□□□ 0.91
SMAD6O43541 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.72■□□□□ 0.91
SMAD6O43541 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.72■□□□□ 0.91
SMAD6O43541 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SMAD6O43541 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMAD6O43541 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
SMAD6O43541 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMAD6O43541 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 ABHD17AP1-201ENST00000358206 933 ntBASIC20.71■□□□□ 0.91
SMAD6O43541 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.71■□□□□ 0.91
SMAD6O43541 MIR2861-201ENST00000636310 90 ntBASIC20.71■□□□□ 0.91
SMAD6O43541 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.71■□□□□ 0.91
SMAD6O43541 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMAD6O43541 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMAD6O43541 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SMAD6O43541 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMAD6O43541 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD6O43541 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.7■□□□□ 0.9
SMAD6O43541 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.7■□□□□ 0.9
SMAD6O43541 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD6O43541 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.7■□□□□ 0.9
SMAD6O43541 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD6O43541 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMAD6O43541 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SMAD6O43541 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMAD6O43541 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.69■□□□□ 0.9
SMAD6O43541 PGM5P4-201ENST00000421970 445 ntBASIC20.69■□□□□ 0.9
SMAD6O43541 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMAD6O43541 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SMAD6O43541 C2orf69P4-201ENST00000565394 541 ntBASIC20.69■□□□□ 0.9
SMAD6O43541 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.69■□□□□ 0.9
SMAD6O43541 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.69■□□□□ 0.9
SMAD6O43541 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.69■□□□□ 0.9
SMAD6O43541 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMAD6O43541 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
SMAD6O43541 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMAD6O43541 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SMAD6O43541 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SMAD6O43541 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMAD6O43541 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMAD6O43541 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMAD6O43541 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.68■□□□□ 0.9
SMAD6O43541 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMAD6O43541 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms