Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.51■■□□□ 1.35
ATP2A1O14983 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.51■■□□□ 1.35
ATP2A1O14983 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.51■■□□□ 1.35
ATP2A1O14983 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.51■■□□□ 1.35
ATP2A1O14983 AC233263.1-201ENST00000578059 224 ntBASIC23.51■■□□□ 1.35
ATP2A1O14983 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP2A1O14983 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
ATP2A1O14983 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
ATP2A1O14983 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.5■■□□□ 1.35
ATP2A1O14983 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
ATP2A1O14983 AC244015.2-201ENST00000616358 1861 ntBASIC23.5■■□□□ 1.35
ATP2A1O14983 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
ATP2A1O14983 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.5■■□□□ 1.35
ATP2A1O14983 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.5■■□□□ 1.35
ATP2A1O14983 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.5■■□□□ 1.35
ATP2A1O14983 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.5■■□□□ 1.35
ATP2A1O14983 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP2A1O14983 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ATP2A1O14983 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.49■■□□□ 1.35
ATP2A1O14983 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.49■■□□□ 1.35
ATP2A1O14983 AC008550.1-201ENST00000511500 884 ntBASIC23.49■■□□□ 1.35
ATP2A1O14983 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.49■■□□□ 1.35
ATP2A1O14983 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ATP2A1O14983 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.49■■□□□ 1.35
ATP2A1O14983 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.49■■□□□ 1.35
ATP2A1O14983 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 AC079834.2-201ENST00000609776 1949 ntBASIC23.49■■□□□ 1.35
ATP2A1O14983 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ATP2A1O14983 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
ATP2A1O14983 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
ATP2A1O14983 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 AL596275.1-201ENST00000423464 877 ntBASIC23.48■■□□□ 1.35
ATP2A1O14983 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP2A1O14983 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
ATP2A1O14983 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.48■■□□□ 1.35
ATP2A1O14983 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.48■■□□□ 1.35
ATP2A1O14983 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP2A1O14983 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP2A1O14983 AC011484.1-201ENST00000377652 1995 ntBASIC23.48■■□□□ 1.35
ATP2A1O14983 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.48■■□□□ 1.35
ATP2A1O14983 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.48■■□□□ 1.35
ATP2A1O14983 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
ATP2A1O14983 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ATP2A1O14983 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP2A1O14983 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
ATP2A1O14983 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
ATP2A1O14983 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 C1QBPP2-201ENST00000528754 825 ntBASIC23.47■■□□□ 1.35
ATP2A1O14983 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.47■■□□□ 1.35
ATP2A1O14983 AC005829.2-201ENST00000571422 1056 ntBASIC23.47■■□□□ 1.35
ATP2A1O14983 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.47■■□□□ 1.35
ATP2A1O14983 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
ATP2A1O14983 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP2A1O14983 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.47■■□□□ 1.35
ATP2A1O14983 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
ATP2A1O14983 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP2A1O14983 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.46■■□□□ 1.35
ATP2A1O14983 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP2A1O14983 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP2A1O14983 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP2A1O14983 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.46■■□□□ 1.35
ATP2A1O14983 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP2A1O14983 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms