Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN9O14815 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CAPN9O14815 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.56■■□□□ 1.04
CAPN9O14815 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN9O14815 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.56■■□□□ 1.04
CAPN9O14815 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN9O14815 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CAPN9O14815 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN9O14815 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CAPN9O14815 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.55■■□□□ 1.04
CAPN9O14815 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.55■■□□□ 1.04
CAPN9O14815 RARRES2P4-201ENST00000514074 484 ntBASIC21.55■■□□□ 1.04
CAPN9O14815 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CAPN9O14815 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CAPN9O14815 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN9O14815 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN9O14815 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN9O14815 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.54■■□□□ 1.04
CAPN9O14815 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 AL050303.2-201ENST00000619798 666 ntBASIC21.54■■□□□ 1.04
CAPN9O14815 OR10C1-204ENST00000622521 1039 ntBASIC21.54■■□□□ 1.04
CAPN9O14815 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CAPN9O14815 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CAPN9O14815 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN9O14815 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CAPN9O14815 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CAPN9O14815 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.53■■□□□ 1.04
CAPN9O14815 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CAPN9O14815 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CAPN9O14815 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN9O14815 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.53■■□□□ 1.04
CAPN9O14815 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CAPN9O14815 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPN9O14815 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CAPN9O14815 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.52■■□□□ 1.04
CAPN9O14815 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.52■■□□□ 1.04
CAPN9O14815 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.52■■□□□ 1.04
CAPN9O14815 AF201337.1-201ENST00000520239 748 ntBASIC21.52■■□□□ 1.04
CAPN9O14815 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
CAPN9O14815 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.52■■□□□ 1.04
CAPN9O14815 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.52■■□□□ 1.04
CAPN9O14815 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CAPN9O14815 PLK5-205ENST00000642079 1969 ntBASIC21.52■■□□□ 1.04
CAPN9O14815 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CAPN9O14815 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CAPN9O14815 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CAPN9O14815 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.52■■□□□ 1.03
CAPN9O14815 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CAPN9O14815 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CAPN9O14815 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CAPN9O14815 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CAPN9O14815 AC105036.2-201ENST00000569468 176 ntBASIC21.51■■□□□ 1.03
CAPN9O14815 AC133552.2-202ENST00000575694 574 ntBASIC21.51■■□□□ 1.03
CAPN9O14815 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms