Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AP004607.7-201ENST00000527152 1677 ntBASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SPCS2P3-201ENST00000500401 656 ntBASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AC120024.1-201ENST00000562672 995 ntBASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AC019171.1-201ENST00000601251 1056 ntBASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AC005703.6-201ENST00000623265 1329 ntBASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 AL034346.1-201ENST00000568244 1277 ntBASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM256-PLSCR3K7ERE1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 TCF3P1-201ENST00000423021 1937 ntBASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
TMEM256-PLSCR3K7ERE1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms