Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01548A6NM66 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 AC006128.1-201ENST00000624704 1661 ntBASIC16.16■□□□□ 0.18
LINC01548A6NM66 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 KRT18P68-201ENST00000392293 1000 ntBASIC16.16■□□□□ 0.18
LINC01548A6NM66 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01548A6NM66 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LINC01548A6NM66 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.15■□□□□ 0.18
LINC01548A6NM66 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01548A6NM66 AL121603.2-201ENST00000557373 2117 ntBASIC16.15■□□□□ 0.18
LINC01548A6NM66 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LINC01548A6NM66 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC01548A6NM66 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 LSM12P1-201ENST00000411836 588 ntBASIC16.14■□□□□ 0.17
LINC01548A6NM66 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.14■□□□□ 0.17
LINC01548A6NM66 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC01548A6NM66 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01548A6NM66 PKD1P6-201ENST00000343738 4769 ntBASIC16.14■□□□□ 0.17
LINC01548A6NM66 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LINC01548A6NM66 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01548A6NM66 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms