Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RTL1A6NKG5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.35■■□□□ 1.97
RTL1A6NKG5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
RTL1A6NKG5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL1A6NKG5 Z99916.2-201ENST00000604037 246 ntBASIC27.35■■□□□ 1.97
RTL1A6NKG5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 AL117328.2-201ENST00000624617 1940 ntBASIC27.34■■□□□ 1.97
RTL1A6NKG5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTL1A6NKG5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 RER1-204ENST00000378518 522 ntTSL 3 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RTL1A6NKG5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
RTL1A6NKG5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTL1A6NKG5 AC120498.8-201ENST00000614275 531 ntBASIC27.33■■□□□ 1.97
RTL1A6NKG5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
RTL1A6NKG5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
RTL1A6NKG5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 AC239809.2-201ENST00000415381 517 ntBASIC27.32■■□□□ 1.96
RTL1A6NKG5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL1A6NKG5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC27.32■■□□□ 1.96
RTL1A6NKG5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RTL1A6NKG5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL1A6NKG5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RTL1A6NKG5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RTL1A6NKG5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RTL1A6NKG5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.31■■□□□ 1.96
RTL1A6NKG5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RTL1A6NKG5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC27.3■■□□□ 1.96
RTL1A6NKG5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 SNORA78-201ENST00000459373 127 ntBASIC27.3■■□□□ 1.96
RTL1A6NKG5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 AC233702.5-201ENST00000584107 538 ntBASIC27.3■■□□□ 1.96
RTL1A6NKG5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL1A6NKG5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RTL1A6NKG5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 AC011484.1-201ENST00000377652 1995 ntBASIC27.29■■□□□ 1.96
RTL1A6NKG5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC27.29■■□□□ 1.96
RTL1A6NKG5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL1A6NKG5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms